Gene annotation
Transcriptome id Sobic.002G072200.1
Synonym Sb02g006080
Functional annotation expressed protein
UniProt C5XCP2
Pfam -
Panther DB PTHR33181 PTHR33181:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43150 : -
RAP-DB (Rice) LOC_Os03g59210.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK20421
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
4 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
5 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
6 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G208600 receptor kinase like protein, putative, expressed -
9 Sobic.003G099166 - -
10 Sobic.001G334900 X8 domain containing protein, expressed -
11 Sobic.001G345900 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.008G164900 membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
15 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
16 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
17 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.001G534532 - -
19 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic002G072200 Sobic002G072200 Sobic009G032600 Sobic009G032600 Sobic002G072200--Sobic009G032600 Sobic006G075000 Sobic006G075000 Sobic002G072200--Sobic006G075000 Sobic003G062000 Sobic003G062000 Sobic002G072200--Sobic003G062000 Sobic009G226900 Sobic009G226900 Sobic002G072200--Sobic009G226900 Sobic009G232200 Sobic009G232200 Sobic002G072200--Sobic009G232200 Sobic006G036400 Sobic006G036400 Sobic002G072200--Sobic006G036400 Sobic010G086800 Sobic010G086800 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic009G032600--Sobic002G072200 Sobic009G032600--Sobic010G086800 Sobic004G168700 Sobic004G168700 Sobic009G032600--Sobic004G168700 Sobic009G032600--Sobic003G062000 Sobic009G032600--Sobic009G232200 Sobic009G032600--Sobic009G226900 Sobic009G032600--Sobic006G075000 Sobic004G319600 Sobic004G319600 Sobic009G032600--Sobic004G319600 Sobic009G032600--Sobic006G036400 Sobic010G096100 Sobic010G096100 Sobic006G075000--Sobic010G096100 Sobic006G075000--Sobic001G208600 Sobic001G484000 Sobic001G484000 Sobic006G075000--Sobic001G484000 Sobic006G075000--Sobic009G226900 Sobic006G075000--Sobic002G072200 Sobic006G075000--Sobic003G099166 Sobic003G352700 Sobic003G352700 Sobic006G075000--Sobic003G352700 Sobic009G026101 Sobic009G026101 Sobic006G075000--Sobic009G026101 Sobic002G338400 Sobic002G338400 Sobic006G075000--Sobic002G338400 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic001G224300 Sobic001G224300 Sobic003G062000--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic009G226900--Sobic006G075000 Sobic001G334900 Sobic001G334900 Sobic009G232200--Sobic001G334900 Sobic002G347300 Sobic002G347300 Sobic009G232200--Sobic002G347300 Sobic009G232200--Sobic002G338400 Sobic006G278100 Sobic006G278100 Sobic009G232200--Sobic006G278100 Sobic009G232200--Sobic006G075000 Sobic009G232200--Sobic004G168700 Sobic009G232200--Sobic002G072200 Sobic009G232200--Sobic009G032600 Sobic002G252000 Sobic002G252000 Sobic009G232200--Sobic002G252000 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic001G409100 Sobic001G409100 Sobic006G036400--Sobic001G409100 Sobic009G034300 Sobic009G034300 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic001G360800 Sobic001G360800 Sobic006G036400--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic006G036400--Sobic004G221300 Sobic010G086800--Sobic003G062000 Sobic010G086800--Sobic004G168700 Sobic010G086800--Sobic009G032600 Sobic010G086800--Sobic006G036400 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic009G162500 Sobic009G162500 Sobic010G086800--Sobic009G162500 Sobic005G145100 Sobic005G145100 Sobic001G208600--Sobic005G145100 Sobic001G208600--Sobic003G099166 Sobic001G208600--Sobic006G075000 Sobic003G239100 Sobic003G239100 Sobic001G208600--Sobic003G239100 Sobic009G017500 Sobic009G017500 Sobic001G208600--Sobic009G017500 Sobic002G053900 Sobic002G053900 Sobic001G208600--Sobic002G053900 Sobic001G208600--Sobic001G334900 Sobic002G030800 Sobic002G030800 Sobic001G208600--Sobic002G030800 Sobic001G208600--Sobic003G352700 Sobic003G099166--Sobic001G208600 Sobic003G099166--Sobic001G484000 Sobic001G263900 Sobic001G263900 Sobic003G099166--Sobic001G263900 Sobic003G099166--Sobic006G075000 Sobic005G052500 Sobic005G052500 Sobic003G099166--Sobic005G052500 Sobic003G082700 Sobic003G082700 Sobic003G099166--Sobic003G082700 Sobic003G099166--Sobic003G352700 Sobic003G099166--Sobic002G347300 Sobic009G221900 Sobic009G221900 Sobic003G099166--Sobic009G221900
Octagon: transcription factors


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