Gene annotation
Transcriptome id Sobic.001G534532.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBY8
Pfam PF00069
Panther DB PTHR27003 PTHR27003:SF119
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G33260 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g02190.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017428 , Zm00025a053530 , Zm00025a006315 , Zm00025a008603 , Zm00025a032161 , Zm00025a056619
Brachypodium KQK00546 , KQK24034 , KQK24035 , KQJ97394
Barley HORVU5Hr1G107330.1 , HORVU5Hr1G107330.2 , HORVU4Hr1G089200.2 , HORVU4Hr1G089200.1 , HORVU1Hr1G047010.1 , HORVU4Hr1G015710.2 , HORVU4Hr1G015710.5
Wheat TraesCS6B02G284500 , TraesCS1A02G177000 , TraesCS1B02G203200 , TraesCS6A02G240100 , TraesCS6D02G222400 , TraesCS1D02G175400 , TraesCS2B02G407100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.002G072200 expressed protein -
3 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
4 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
5 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
7 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
8 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
9 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
10 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
11 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
13 Sobic.007G033400 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
15 Sobic.007G001900 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
17 Sobic.008G059800 expressed protein -
18 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
20 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A


Gene co-expression network
sample Sobic001G534532 Sobic001G534532 Sobic003G386200 Sobic003G386200 Sobic001G534532--Sobic003G386200 Sobic002G072200 Sobic002G072200 Sobic001G534532--Sobic002G072200 Sobic009G226900 Sobic009G226900 Sobic001G534532--Sobic009G226900 Sobic003G062000 Sobic003G062000 Sobic001G534532--Sobic003G062000 Sobic009G032600 Sobic009G032600 Sobic001G534532--Sobic009G032600 Sobic003G427900 Sobic003G427900 Sobic001G534532--Sobic003G427900 Sobic004G344200 Sobic004G344200 Sobic001G534532--Sobic004G344200 Sobic009G162500 Sobic009G162500 Sobic001G534532--Sobic009G162500 Sobic006G001000 Sobic006G001000 Sobic001G534532--Sobic006G001000 Sobic006G036400 Sobic006G036400 Sobic003G386200--Sobic006G036400 Sobic003G386200--Sobic009G226900 Sobic003G296400 Sobic003G296400 Sobic003G386200--Sobic003G296400 Sobic003G386200--Sobic003G062000 Sobic003G386200--Sobic003G427900 Sobic003G386200--Sobic009G162500 Sobic002G205500 Sobic002G205500 Sobic003G386200--Sobic002G205500 Sobic001G224300 Sobic001G224300 Sobic003G386200--Sobic001G224300 Sobic003G386200--Sobic001G534532 Sobic002G072200--Sobic009G032600 Sobic006G075000 Sobic006G075000 Sobic002G072200--Sobic006G075000 Sobic002G072200--Sobic003G062000 Sobic002G072200--Sobic009G226900 Sobic009G232200 Sobic009G232200 Sobic002G072200--Sobic009G232200 Sobic002G072200--Sobic006G036400 Sobic010G086800 Sobic010G086800 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic009G226900--Sobic006G075000 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic003G062000--Sobic001G224300 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G062000--Sobic003G386200 Sobic009G032600--Sobic002G072200 Sobic009G032600--Sobic010G086800 Sobic004G168700 Sobic004G168700 Sobic009G032600--Sobic004G168700 Sobic009G032600--Sobic003G062000 Sobic009G032600--Sobic009G232200 Sobic009G032600--Sobic009G226900 Sobic009G032600--Sobic006G075000 Sobic004G319600 Sobic004G319600 Sobic009G032600--Sobic004G319600 Sobic009G032600--Sobic006G036400 Sobic003G352800 Sobic003G352800 Sobic003G427900--Sobic003G352800 Sobic003G427900--Sobic010G086800 Sobic003G427900--Sobic003G296400 Sobic006G066500 Sobic006G066500 Sobic003G427900--Sobic006G066500 Sobic003G427900--Sobic009G226900 Sobic001G468300 Sobic001G468300 Sobic003G427900--Sobic001G468300 Sobic003G427900--Sobic006G036400 Sobic003G427900--Sobic003G386200 Sobic003G427900--Sobic003G062000 Sobic002G003200 Sobic002G003200 Sobic004G344200--Sobic002G003200 Sobic009G153800 Sobic009G153800 Sobic004G344200--Sobic009G153800 Sobic004G344200--Sobic003G352800 Sobic008G059800 Sobic008G059800 Sobic004G344200--Sobic008G059800 Sobic008G163000 Sobic008G163000 Sobic004G344200--Sobic008G163000 Sobic008G112200 Sobic008G112200 Sobic004G344200--Sobic008G112200 Sobic002G164600 Sobic002G164600 Sobic004G344200--Sobic002G164600 Sobic004G344200--Sobic006G001000 Sobic009G241600 Sobic009G241600 Sobic004G344200--Sobic009G241600 Sobic009G162500--Sobic003G296400 Sobic009G162500--Sobic002G205500 Sobic009G162500--Sobic003G062000 Sobic003G151300 Sobic003G151300 Sobic009G162500--Sobic003G151300 Sobic009G162500--Sobic002G003200 Sobic003G366300 Sobic003G366300 Sobic009G162500--Sobic003G366300 Sobic001G535400 Sobic001G535400 Sobic009G162500--Sobic001G535400 Sobic009G162500--Sobic009G153800 Sobic009G162500--Sobic009G032600 Sobic001G275600 Sobic001G275600 Sobic006G001000--Sobic001G275600 Sobic006G001000--Sobic008G163000 Sobic009G151000 Sobic009G151000 Sobic006G001000--Sobic009G151000 Sobic006G001000--Sobic002G003200 Sobic006G001000--Sobic003G352800 Sobic003G108000 Sobic003G108000 Sobic006G001000--Sobic003G108000 Sobic009G215600 Sobic009G215600 Sobic006G001000--Sobic009G215600 Sobic006G001000--Sobic004G344200 Sobic006G001000--Sobic003G427900
Octagon: transcription factors


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