Gene annotation
Transcriptome id Sobic.004G161400.4,Sobic.004G161400.2,Sobic.004G161400.1,Sobic.004G161400.5,Sobic.004G161400.3
Synonym Sb04g021330
Functional annotation protein binding protein, putative, expressed
UniProt A0A194YQ02
Pfam PF13920
Panther DB PTHR10044 PTHR10044:SF137
NCBI CDD KOG1100; Predicted E3 ubiquitin ligase
KEGG Orthology K19042; E3 ubiquitin-protein ligase BOI and related proteins
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79110 : zinc ion binding
RAP-DB (Rice) LOC_Os04g33030.1 : protein binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a055972 , Zm00025a020494 , Zm00025a020497
Brachypodium KQJ99663 , KQJ82395
Barley -
Wheat TraesCS6A02G247500 , TraesCS2A02G290000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G209800 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
2 Sobic.010G234900 armadillo/beta-catenin repeat family protein, putative, expressed -
3 Sobic.002G380700 expressed protein -
4 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.003G095200 glycosyltransferase protein, putative, expressed -
7 Sobic.009G203400 IQ calmodulin-binding motif family protein, putative, expressed -
8 Sobic.007G039100 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.009G136600 peptide transporter PTR2, putative, expressed -
10 Sobic.008G140800 expressed protein -
11 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
12 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
13 Sobic.009G162900 expressed protein -
14 Sobic.002G005200 dirigent, putative, expressed -
15 Sobic.001G427400 AAA-type ATPase family protein, putative, expressed K11269: CTF18, chromosome transmission fidelity protein 18
16 Sobic.004G061600 expressed protein -
17 Sobic.004G336700 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.007G092300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
20 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1


Gene co-expression network
sample Sobic004G161400 Sobic004G161400 Sobic010G209800 Sobic010G209800 Sobic004G161400--Sobic010G209800 Sobic010G234900 Sobic010G234900 Sobic004G161400--Sobic010G234900 Sobic002G380700 Sobic002G380700 Sobic004G161400--Sobic002G380700 Sobic007G130000 Sobic007G130000 Sobic004G161400--Sobic007G130000 Sobic003G377200 Sobic003G377200 Sobic004G161400--Sobic003G377200 Sobic003G095200 Sobic003G095200 Sobic004G161400--Sobic003G095200 Sobic009G203400 Sobic009G203400 Sobic004G161400--Sobic009G203400 Sobic007G039100 Sobic007G039100 Sobic004G161400--Sobic007G039100 Sobic009G136600 Sobic009G136600 Sobic004G161400--Sobic009G136600 Sobic002G035500 Sobic002G035500 Sobic010G209800--Sobic002G035500 Sobic003G406500 Sobic003G406500 Sobic010G209800--Sobic003G406500 Sobic007G153300 Sobic007G153300 Sobic010G209800--Sobic007G153300 Sobic010G209800--Sobic010G234900 Sobic004G336700 Sobic004G336700 Sobic010G209800--Sobic004G336700 Sobic003G359200 Sobic003G359200 Sobic010G209800--Sobic003G359200 Sobic001G494300 Sobic001G494300 Sobic010G209800--Sobic001G494300 Sobic002G202500 Sobic002G202500 Sobic010G209800--Sobic002G202500 Sobic007G038000 Sobic007G038000 Sobic010G209800--Sobic007G038000 Sobic003G432000 Sobic003G432000 Sobic010G234900--Sobic003G432000 Sobic010G234900--Sobic010G209800 Sobic005G129600 Sobic005G129600 Sobic010G234900--Sobic005G129600 Sobic010G234900--Sobic007G038000 Sobic007G113900 Sobic007G113900 Sobic010G234900--Sobic007G113900 Sobic004G133000 Sobic004G133000 Sobic010G234900--Sobic004G133000 Sobic010G234900--Sobic002G202500 Sobic006G176400 Sobic006G176400 Sobic010G234900--Sobic006G176400 Sobic004G113900 Sobic004G113900 Sobic010G234900--Sobic004G113900 Sobic002G380700--Sobic007G130000 Sobic002G380700--Sobic001G494300 Sobic001G427400 Sobic001G427400 Sobic002G380700--Sobic001G427400 Sobic002G380700--Sobic004G161400 Sobic004G198200 Sobic004G198200 Sobic002G380700--Sobic004G198200 Sobic002G394200 Sobic002G394200 Sobic002G380700--Sobic002G394200 Sobic006G155900 Sobic006G155900 Sobic002G380700--Sobic006G155900 Sobic004G237300 Sobic004G237300 Sobic002G380700--Sobic004G237300 Sobic002G380700--Sobic002G035500 Sobic007G130000--Sobic004G198200 Sobic007G130000--Sobic001G427400 Sobic008G020500 Sobic008G020500 Sobic007G130000--Sobic008G020500 Sobic005G056800 Sobic005G056800 Sobic007G130000--Sobic005G056800 Sobic007G130000--Sobic001G494300 Sobic007G130000--Sobic006G155900 Sobic003G040100 Sobic003G040100 Sobic007G130000--Sobic003G040100 Sobic007G130000--Sobic002G380700 Sobic001G284900 Sobic001G284900 Sobic007G130000--Sobic001G284900 Sobic001G267500 Sobic001G267500 Sobic003G377200--Sobic001G267500 Sobic007G208500 Sobic007G208500 Sobic003G377200--Sobic007G208500 Sobic006G186200 Sobic006G186200 Sobic003G377200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic003G377200--Sobic006G163650 Sobic004G180600 Sobic004G180600 Sobic003G377200--Sobic004G180600 Sobic003G390300 Sobic003G390300 Sobic003G377200--Sobic003G390300 Sobic003G377200--Sobic009G203400 Sobic005G076650 Sobic005G076650 Sobic003G377200--Sobic005G076650 Sobic004G156600 Sobic004G156600 Sobic003G377200--Sobic004G156600 Sobic009G076800 Sobic009G076800 Sobic003G095200--Sobic009G076800 Sobic003G095200--Sobic004G161400 Sobic001G189500 Sobic001G189500 Sobic003G095200--Sobic001G189500 Sobic005G035000 Sobic005G035000 Sobic003G095200--Sobic005G035000 Sobic002G005200 Sobic002G005200 Sobic003G095200--Sobic002G005200 Sobic001G005000 Sobic001G005000 Sobic003G095200--Sobic001G005000 Sobic001G302300 Sobic001G302300 Sobic003G095200--Sobic001G302300 Sobic003G054100 Sobic003G054100 Sobic003G095200--Sobic003G054100 Sobic004G153700 Sobic004G153700 Sobic003G095200--Sobic004G153700 Sobic006G273500 Sobic006G273500 Sobic009G203400--Sobic006G273500 Sobic001G104400 Sobic001G104400 Sobic009G203400--Sobic001G104400 Sobic009G203400--Sobic007G208500 Sobic009G203400--Sobic004G180600 Sobic008G098098 Sobic008G098098 Sobic009G203400--Sobic008G098098 Sobic009G203400--Sobic006G186200 Sobic004G061600 Sobic004G061600 Sobic009G203400--Sobic004G061600 Sobic008G119200 Sobic008G119200 Sobic009G203400--Sobic008G119200 Sobic004G107400 Sobic004G107400 Sobic009G203400--Sobic004G107400 Sobic008G140800 Sobic008G140800 Sobic007G039100--Sobic008G140800 Sobic007G039100--Sobic002G005200 Sobic002G164600 Sobic002G164600 Sobic007G039100--Sobic002G164600 Sobic007G223600 Sobic007G223600 Sobic007G039100--Sobic007G223600 Sobic009G153800 Sobic009G153800 Sobic007G039100--Sobic009G153800 Sobic003G236701 Sobic003G236701 Sobic007G039100--Sobic003G236701 Sobic007G091900 Sobic007G091900 Sobic007G039100--Sobic007G091900 Sobic008G059800 Sobic008G059800 Sobic007G039100--Sobic008G059800 Sobic007G039100--Sobic004G161400 Sobic003G006500 Sobic003G006500 Sobic009G136600--Sobic003G006500 Sobic009G254400 Sobic009G254400 Sobic009G136600--Sobic009G254400 Sobic009G136600--Sobic003G406500 Sobic001G263500 Sobic001G263500 Sobic009G136600--Sobic001G263500 Sobic001G247700 Sobic001G247700 Sobic009G136600--Sobic001G247700 Sobic009G136600--Sobic006G163650 Sobic002G425600 Sobic002G425600 Sobic009G136600--Sobic002G425600 Sobic005G168500 Sobic005G168500 Sobic009G136600--Sobic005G168500 Sobic009G136600--Sobic010G209800
Octagon: transcription factors


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