Gene annotation
Transcriptome id Sobic.009G162900.1
Synonym Sb09g022520
Functional annotation expressed protein
UniProt C5YZ94
Pfam -
Panther DB PTHR36375:SF1 PTHR36375
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55420 : -
RAP-DB (Rice) LOC_Os05g38470.2 : expressed protein
MaizeGDB (Corn) Zm00025a043897
Brachypodium KQK05909 , PNT71116
Barley HORVU1Hr1G072410.11 , HORVU1Hr1G072410.10 , HORVU1Hr1G072410.13 , HORVU1Hr1G072410.12 , HORVU1Hr1G072410.15 , HORVU1Hr1G072410.14 , HORVU1Hr1G072410.17 , HORVU1Hr1G072410.16 , HORVU1Hr1G072410.18 , HORVU1Hr1G072410.5 , HORVU1Hr1G072410.4 , HORVU1Hr1G072410.7 , HORVU1Hr1G072410.6 , HORVU1Hr1G072410.1 , HORVU1Hr1G072410.3 , HORVU1Hr1G072410.2 , HORVU1Hr1G072410.9 , HORVU1Hr1G072410.8
Wheat TraesCS1A02G284100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G267500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
2 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.007G208500 expressed protein -
5 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
6 Sobic.004G161400 protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
7 Sobic.004G153700 expressed protein -
8 Sobic.007G038000 receptor-like protein kinase 5 precursor, putative, expressed -
9 Sobic.007G092300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.004G061600 expressed protein -
11 Sobic.004G043200 expressed protein -
12 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.003G006500 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.003G390300 expressed protein -
15 Sobic.004G172400 Leucine Rich Repeat family protein, expressed -
16 Sobic.005G076650 - -
17 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
19 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
20 Sobic.010G234900 armadillo/beta-catenin repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic009G162900 Sobic009G162900 Sobic001G267500 Sobic001G267500 Sobic009G162900--Sobic001G267500 Sobic003G377200 Sobic003G377200 Sobic009G162900--Sobic003G377200 Sobic001G072900 Sobic001G072900 Sobic009G162900--Sobic001G072900 Sobic007G208500 Sobic007G208500 Sobic009G162900--Sobic007G208500 Sobic001G062700 Sobic001G062700 Sobic009G162900--Sobic001G062700 Sobic004G161400 Sobic004G161400 Sobic009G162900--Sobic004G161400 Sobic004G153700 Sobic004G153700 Sobic009G162900--Sobic004G153700 Sobic007G038000 Sobic007G038000 Sobic009G162900--Sobic007G038000 Sobic007G092300 Sobic007G092300 Sobic009G162900--Sobic007G092300 Sobic001G267500--Sobic001G072900 Sobic001G267500--Sobic003G377200 Sobic005G017100 Sobic005G017100 Sobic001G267500--Sobic005G017100 Sobic004G076850 Sobic004G076850 Sobic001G267500--Sobic004G076850 Sobic001G267500--Sobic009G162900 Sobic005G076650 Sobic005G076650 Sobic001G267500--Sobic005G076650 Sobic001G312700 Sobic001G312700 Sobic001G267500--Sobic001G312700 Sobic006G077600 Sobic006G077600 Sobic001G267500--Sobic006G077600 Sobic001G267500--Sobic007G208500 Sobic003G377200--Sobic001G267500 Sobic003G377200--Sobic007G208500 Sobic006G186200 Sobic006G186200 Sobic003G377200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic003G377200--Sobic006G163650 Sobic004G180600 Sobic004G180600 Sobic003G377200--Sobic004G180600 Sobic003G390300 Sobic003G390300 Sobic003G377200--Sobic003G390300 Sobic009G203400 Sobic009G203400 Sobic003G377200--Sobic009G203400 Sobic003G377200--Sobic005G076650 Sobic004G156600 Sobic004G156600 Sobic003G377200--Sobic004G156600 Sobic001G072900--Sobic001G267500 Sobic001G487000 Sobic001G487000 Sobic001G072900--Sobic001G487000 Sobic001G072900--Sobic006G077600 Sobic002G363700 Sobic002G363700 Sobic001G072900--Sobic002G363700 Sobic001G072900--Sobic003G377200 Sobic001G541601 Sobic001G541601 Sobic001G072900--Sobic001G541601 Sobic001G072900--Sobic007G208500 Sobic006G278900 Sobic006G278900 Sobic001G072900--Sobic006G278900 Sobic009G228300 Sobic009G228300 Sobic001G072900--Sobic009G228300 Sobic006G273500 Sobic006G273500 Sobic007G208500--Sobic006G273500 Sobic007G208500--Sobic009G203400 Sobic007G208500--Sobic004G180600 Sobic008G098098 Sobic008G098098 Sobic007G208500--Sobic008G098098 Sobic007G208500--Sobic006G186200 Sobic002G256500 Sobic002G256500 Sobic007G208500--Sobic002G256500 Sobic004G061600 Sobic004G061600 Sobic007G208500--Sobic004G061600 Sobic004G043200 Sobic004G043200 Sobic007G208500--Sobic004G043200 Sobic007G208500--Sobic003G390300 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic001G062700--Sobic008G136900 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic010G014900 Sobic010G014900 Sobic001G062700--Sobic010G014900 Sobic004G107400 Sobic004G107400 Sobic001G062700--Sobic004G107400 Sobic010G209800 Sobic010G209800 Sobic004G161400--Sobic010G209800 Sobic010G234900 Sobic010G234900 Sobic004G161400--Sobic010G234900 Sobic002G380700 Sobic002G380700 Sobic004G161400--Sobic002G380700 Sobic007G130000 Sobic007G130000 Sobic004G161400--Sobic007G130000 Sobic004G161400--Sobic003G377200 Sobic003G095200 Sobic003G095200 Sobic004G161400--Sobic003G095200 Sobic004G161400--Sobic009G203400 Sobic007G039100 Sobic007G039100 Sobic004G161400--Sobic007G039100 Sobic009G136600 Sobic009G136600 Sobic004G161400--Sobic009G136600 Sobic003G226100 Sobic003G226100 Sobic004G153700--Sobic003G226100 Sobic010G008000 Sobic010G008000 Sobic004G153700--Sobic010G008000 Sobic010G194500 Sobic010G194500 Sobic004G153700--Sobic010G194500 Sobic009G204800 Sobic009G204800 Sobic004G153700--Sobic009G204800 Sobic003G083700 Sobic003G083700 Sobic004G153700--Sobic003G083700 Sobic006G018900 Sobic006G018900 Sobic004G153700--Sobic006G018900 Sobic004G153700--Sobic007G206700 Sobic004G153700--Sobic007G092300 Sobic004G153700--Sobic010G259200 Sobic002G425600 Sobic002G425600 Sobic007G038000--Sobic002G425600 Sobic007G153300 Sobic007G153300 Sobic007G038000--Sobic007G153300 Sobic007G181100 Sobic007G181100 Sobic007G038000--Sobic007G181100 Sobic003G432000 Sobic003G432000 Sobic007G038000--Sobic003G432000 Sobic007G038000--Sobic010G234900 Sobic003G083500 Sobic003G083500 Sobic007G038000--Sobic003G083500 Sobic007G038000--Sobic010G209800 Sobic003G359200 Sobic003G359200 Sobic007G038000--Sobic003G359200 Sobic001G247700 Sobic001G247700 Sobic007G038000--Sobic001G247700 Sobic007G092300--Sobic001G062700 Sobic007G092300--Sobic010G119600 Sobic007G092300--Sobic010G259200 Sobic007G092300--Sobic003G390300 Sobic007G092300--Sobic004G061600 Sobic007G092300--Sobic008G136900 Sobic010G014300 Sobic010G014300 Sobic007G092300--Sobic010G014300 Sobic007G092300--Sobic007G206700 Sobic005G168500 Sobic005G168500 Sobic007G092300--Sobic005G168500
Octagon: transcription factors


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