Gene annotation
Transcriptome id Sobic.004G172400.1,Sobic.004G172400.2
Synonym Sb04g022320
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A194YQA1 , A0A194YQ54
Pfam -
Panther DB PTHR23155 PTHR23155:SF638
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45500 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os02g34490.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) Zm00025a031579
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G092300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.004G153700 expressed protein -
3 Sobic.002G314500 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
4 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
6 Sobic.007G038000 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
8 Sobic.002G299800 expressed protein -
9 Sobic.004G061600 expressed protein -
10 Sobic.003G390300 expressed protein -
11 Sobic.010G194500 expansin precursor, putative, expressed -
12 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.007G015400 a_IG002N01.7, putative, expressed -
14 Sobic.004G128800 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
15 Sobic.008G136900 expressed protein -
16 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
17 Sobic.004G156600 - -
18 Sobic.003G111600 expressed protein -
19 Sobic.003G226100 expressed protein -
20 Sobic.003G286400 DUF623 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G172400 Sobic004G172400 Sobic007G092300 Sobic007G092300 Sobic004G172400--Sobic007G092300 Sobic004G153700 Sobic004G153700 Sobic004G172400--Sobic004G153700 Sobic002G314500 Sobic002G314500 Sobic004G172400--Sobic002G314500 Sobic010G008000 Sobic010G008000 Sobic004G172400--Sobic010G008000 Sobic001G062700 Sobic001G062700 Sobic004G172400--Sobic001G062700 Sobic007G038000 Sobic007G038000 Sobic004G172400--Sobic007G038000 Sobic010G119600 Sobic010G119600 Sobic004G172400--Sobic010G119600 Sobic002G299800 Sobic002G299800 Sobic004G172400--Sobic002G299800 Sobic004G061600 Sobic004G061600 Sobic004G172400--Sobic004G061600 Sobic007G092300--Sobic001G062700 Sobic007G092300--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic007G092300--Sobic010G259200 Sobic003G390300 Sobic003G390300 Sobic007G092300--Sobic003G390300 Sobic007G092300--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic007G092300--Sobic008G136900 Sobic010G014300 Sobic010G014300 Sobic007G092300--Sobic010G014300 Sobic007G206700 Sobic007G206700 Sobic007G092300--Sobic007G206700 Sobic005G168500 Sobic005G168500 Sobic007G092300--Sobic005G168500 Sobic003G226100 Sobic003G226100 Sobic004G153700--Sobic003G226100 Sobic004G153700--Sobic010G008000 Sobic010G194500 Sobic010G194500 Sobic004G153700--Sobic010G194500 Sobic009G204800 Sobic009G204800 Sobic004G153700--Sobic009G204800 Sobic003G083700 Sobic003G083700 Sobic004G153700--Sobic003G083700 Sobic006G018900 Sobic006G018900 Sobic004G153700--Sobic006G018900 Sobic004G153700--Sobic007G206700 Sobic004G153700--Sobic007G092300 Sobic004G153700--Sobic010G259200 Sobic001G103400 Sobic001G103400 Sobic002G314500--Sobic001G103400 Sobic004G128800 Sobic004G128800 Sobic002G314500--Sobic004G128800 Sobic002G314500--Sobic008G136900 Sobic006G133650 Sobic006G133650 Sobic002G314500--Sobic006G133650 Sobic002G206000 Sobic002G206000 Sobic002G314500--Sobic002G206000 Sobic002G314500--Sobic003G390300 Sobic001G137200 Sobic001G137200 Sobic002G314500--Sobic001G137200 Sobic008G163800 Sobic008G163800 Sobic002G314500--Sobic008G163800 Sobic003G104900 Sobic003G104900 Sobic002G314500--Sobic003G104900 Sobic010G008000--Sobic004G153700 Sobic010G008000--Sobic003G083700 Sobic010G008000--Sobic010G259200 Sobic010G008000--Sobic007G206700 Sobic010G008000--Sobic010G119600 Sobic002G001300 Sobic002G001300 Sobic010G008000--Sobic002G001300 Sobic010G008000--Sobic010G194500 Sobic010G008000--Sobic003G390300 Sobic001G402701 Sobic001G402701 Sobic010G008000--Sobic001G402701 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic001G062700--Sobic007G092300 Sobic001G062700--Sobic010G119600 Sobic001G062700--Sobic010G259200 Sobic001G062700--Sobic007G206700 Sobic010G014900 Sobic010G014900 Sobic001G062700--Sobic010G014900 Sobic004G107400 Sobic004G107400 Sobic001G062700--Sobic004G107400 Sobic002G425600 Sobic002G425600 Sobic007G038000--Sobic002G425600 Sobic007G153300 Sobic007G153300 Sobic007G038000--Sobic007G153300 Sobic007G181100 Sobic007G181100 Sobic007G038000--Sobic007G181100 Sobic003G432000 Sobic003G432000 Sobic007G038000--Sobic003G432000 Sobic010G234900 Sobic010G234900 Sobic007G038000--Sobic010G234900 Sobic003G083500 Sobic003G083500 Sobic007G038000--Sobic003G083500 Sobic010G209800 Sobic010G209800 Sobic007G038000--Sobic010G209800 Sobic003G359200 Sobic003G359200 Sobic007G038000--Sobic003G359200 Sobic001G247700 Sobic001G247700 Sobic007G038000--Sobic001G247700 Sobic010G119600--Sobic010G259200 Sobic001G483700 Sobic001G483700 Sobic010G119600--Sobic001G483700 Sobic010G119600--Sobic003G390300 Sobic010G119600--Sobic001G137200 Sobic010G002850 Sobic010G002850 Sobic010G119600--Sobic010G002850 Sobic010G119600--Sobic007G206700 Sobic010G119600--Sobic003G104900 Sobic010G119600--Sobic001G062700 Sobic010G119600--Sobic003G083700 Sobic004G156600 Sobic004G156600 Sobic002G299800--Sobic004G156600 Sobic010G078800 Sobic010G078800 Sobic002G299800--Sobic010G078800 Sobic006G186200 Sobic006G186200 Sobic002G299800--Sobic006G186200 Sobic007G076800 Sobic007G076800 Sobic002G299800--Sobic007G076800 Sobic002G299800--Sobic004G061600 Sobic002G299800--Sobic003G390300 Sobic002G299800--Sobic001G062700 Sobic002G299800--Sobic008G136900 Sobic003G265300 Sobic003G265300 Sobic002G299800--Sobic003G265300 Sobic004G061600--Sobic003G390300 Sobic007G158400 Sobic007G158400 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500
Octagon: transcription factors


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