Gene annotation
Transcriptome id Sobic.002G314500.3
Synonym
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt A0A1B6QEG6
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF120
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G11820 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os07g32600.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048187
Brachypodium KQK22839 , PNT75028 , KQK16058
Barley HORVU2Hr1G047410.2 , HORVU2Hr1G047410.3 , HORVU2Hr1G047410.1 , HORVU2Hr1G047410.6 , HORVU2Hr1G047410.4 , HORVU2Hr1G047410.5 , HORVU2Hr1G047430.1 , HORVU4Hr1G067180.8 , HORVU4Hr1G067180.1 , HORVU4Hr1G067180.2 , HORVU4Hr1G067180.5 , HORVU4Hr1G067180.7 , HORVU4Hr1G067180.3 , HORVU4Hr1G067180.4 , HORVU4Hr1G067180.6
Wheat TraesCS4A02G064900 , TraesCS4A02G064900 , TraesCS4B02G242300 , TraesCS2A02G224900 , TraesCS2A02G224900 , TraesCS2B02G274900 , TraesCS2B02G274900 , TraesCS2D02G230900 , TraesCS2D02G230900 , TraesCS4D02G241900 , TraesCS4D02G241900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
2 Sobic.004G128800 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
3 Sobic.008G136900 expressed protein -
4 Sobic.006G133650 - -
5 Sobic.002G206000 BT1 family protein, putative, expressed -
6 Sobic.003G390300 expressed protein -
7 Sobic.001G137200 homeobox domain containing protein, expressed -
8 Sobic.008G163800 expressed protein -
9 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
10 Sobic.001G483700 Cupin domain containing protein, expressed -
11 Sobic.010G002850 - -
12 Sobic.002G010500 expressed protein -
13 Sobic.004G069600 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.003G142900 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
15 Sobic.005G098200 TKL_IRAK_CR4L.7 - The CR4L subfamily has homology with Crinkly4, expressed -
16 Sobic.006G169300 - -
17 Sobic.001G148600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.002G285525 - -
19 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
20 Sobic.004G061600 expressed protein -


Gene co-expression network
sample Sobic002G314500 Sobic002G314500 Sobic001G103400 Sobic001G103400 Sobic002G314500--Sobic001G103400 Sobic004G128800 Sobic004G128800 Sobic002G314500--Sobic004G128800 Sobic008G136900 Sobic008G136900 Sobic002G314500--Sobic008G136900 Sobic006G133650 Sobic006G133650 Sobic002G314500--Sobic006G133650 Sobic002G206000 Sobic002G206000 Sobic002G314500--Sobic002G206000 Sobic003G390300 Sobic003G390300 Sobic002G314500--Sobic003G390300 Sobic001G137200 Sobic001G137200 Sobic002G314500--Sobic001G137200 Sobic008G163800 Sobic008G163800 Sobic002G314500--Sobic008G163800 Sobic003G104900 Sobic003G104900 Sobic002G314500--Sobic003G104900 Sobic003G290700 Sobic003G290700 Sobic001G103400--Sobic003G290700 Sobic002G285525 Sobic002G285525 Sobic001G103400--Sobic002G285525 Sobic009G223700 Sobic009G223700 Sobic001G103400--Sobic009G223700 Sobic003G142900 Sobic003G142900 Sobic001G103400--Sobic003G142900 Sobic001G483700 Sobic001G483700 Sobic001G103400--Sobic001G483700 Sobic009G028600 Sobic009G028600 Sobic001G103400--Sobic009G028600 Sobic004G226300 Sobic004G226300 Sobic001G103400--Sobic004G226300 Sobic001G103400--Sobic001G137200 Sobic006G171000 Sobic006G171000 Sobic001G103400--Sobic006G171000 Sobic006G169300 Sobic006G169300 Sobic004G128800--Sobic006G169300 Sobic004G128800--Sobic009G223700 Sobic001G457100 Sobic001G457100 Sobic004G128800--Sobic001G457100 Sobic004G128800--Sobic001G483700 Sobic004G128800--Sobic002G285525 Sobic010G002850 Sobic010G002850 Sobic004G128800--Sobic010G002850 Sobic004G108900 Sobic004G108900 Sobic004G128800--Sobic004G108900 Sobic004G128800--Sobic009G028600 Sobic004G128800--Sobic001G137200 Sobic008G136900--Sobic003G390300 Sobic004G061600 Sobic004G061600 Sobic008G136900--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic008G136900--Sobic004G107400 Sobic008G136900--Sobic001G103400 Sobic007G158400 Sobic007G158400 Sobic008G136900--Sobic007G158400 Sobic008G136900--Sobic001G483700 Sobic010G014900 Sobic010G014900 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600 Sobic009G039400 Sobic009G039400 Sobic006G133650--Sobic009G039400 Sobic002G188100 Sobic002G188100 Sobic006G133650--Sobic002G188100 Sobic010G029200 Sobic010G029200 Sobic006G133650--Sobic010G029200 Sobic006G167200 Sobic006G167200 Sobic006G133650--Sobic006G167200 Sobic004G069600 Sobic004G069600 Sobic006G133650--Sobic004G069600 Sobic010G208300 Sobic010G208300 Sobic006G133650--Sobic010G208300 Sobic010G045300 Sobic010G045300 Sobic006G133650--Sobic010G045300 Sobic010G122533 Sobic010G122533 Sobic006G133650--Sobic010G122533 Sobic006G133650--Sobic003G142900 Sobic002G206000--Sobic004G069600 Sobic002G206000--Sobic006G133650 Sobic002G206000--Sobic002G314500 Sobic002G121701 Sobic002G121701 Sobic002G206000--Sobic002G121701 Sobic002G206000--Sobic009G039400 Sobic002G206000--Sobic001G103400 Sobic002G120250 Sobic002G120250 Sobic002G206000--Sobic002G120250 Sobic002G206000--Sobic010G208300 Sobic003G119266 Sobic003G119266 Sobic002G206000--Sobic003G119266 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic001G062700 Sobic001G062700 Sobic003G390300--Sobic001G062700 Sobic003G390300--Sobic003G104900 Sobic003G390300--Sobic010G014900 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic003G390300--Sobic009G028600 Sobic001G137200--Sobic002G285525 Sobic010G152700 Sobic010G152700 Sobic001G137200--Sobic010G152700 Sobic001G137200--Sobic006G171000 Sobic005G209800 Sobic005G209800 Sobic001G137200--Sobic005G209800 Sobic001G137200--Sobic004G226300 Sobic008G002100 Sobic008G002100 Sobic001G137200--Sobic008G002100 Sobic007G183000 Sobic007G183000 Sobic001G137200--Sobic007G183000 Sobic001G137200--Sobic001G483700 Sobic001G527400 Sobic001G527400 Sobic001G137200--Sobic001G527400 Sobic008G031600 Sobic008G031600 Sobic008G163800--Sobic008G031600 Sobic008G163800--Sobic001G103400 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic008G163800--Sobic007G158400 Sobic008G163800--Sobic004G061600 Sobic008G163800--Sobic003G390300 Sobic008G163800--Sobic004G107400 Sobic008G163800--Sobic010G029200 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic003G104900--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic003G104900--Sobic008G023000 Sobic003G104900--Sobic001G527400 Sobic003G104900--Sobic007G183000 Sobic005G231800 Sobic005G231800 Sobic003G104900--Sobic005G231800 Sobic003G104900--Sobic004G226300 Sobic003G104900--Sobic006G171000
Octagon: transcription factors


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