Gene annotation
Transcriptome id Sobic.005G098200.1
Synonym CCR4, Sb05g008500
Functional annotation TKL_IRAK_CR4L.7 - The CR4L subfamily has homology with Crinkly4, expressed
UniProt C5Y1N4
Pfam PF00069
Panther DB PTHR27003 PTHR27003:SF4
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G47850 : CRINKLY4 related 4
RAP-DB (Rice) LOC_Os11g11490.1 : TKL_IRAK_CR4L.7 - The CR4L subfamily has homology with Crinkly4, expressed
MaizeGDB (Corn) Zm00025a037066 , Zm00025a040184 , Zm00025a024002 , Zm00025a016933 , Zm00025a029688 , Zm00025a019136 , Zm00025a038864 , Zm00025a023543 , Zm00025a012726 , Zm00025a010905 , Zm00025a004542 , Zm00025a038178 , Zm00025a025630 , Zm00025a030297 , Zm00025a049886 , Zm00025a049884 , Zm00025a049889 , Zm00025a011296 , Zm00025a043529
Brachypodium KQK07880 , KQJ82756 , KQK22781 , KQK03818 , KQK01265 , KQK00402 , PNT69406 , KQJ83300 , KQJ88913 , KQJ86007 , KQK05701 , PNT61355
Barley HORVU1Hr1G083220.12 , HORVU3Hr1G022780.2 , HORVU3Hr1G022780.3 , HORVU3Hr1G022780.6 , HORVU3Hr1G022780.7 , HORVU3Hr1G022780.4 , HORVU3Hr1G022780.5 , HORVU3Hr1G022780.9 , HORVU5Hr1G016730.6 , HORVU2Hr1G076720.1 , HORVU6Hr1G058290.2 , HORVU6Hr1G058290.4 , HORVU6Hr1G058290.6 , HORVU6Hr1G058290.7 , HORVU6Hr1G058290.8 , HORVU3Hr1G038000.1 , HORVU4Hr1G066310.10 , HORVU4Hr1G066310.11 , HORVU1Hr1G083220.9 , HORVU4Hr1G016080.1 , HORVU5Hr1G016730.14 , HORVU5Hr1G016730.11 , HORVU5Hr1G016730.12 , HORVU5Hr1G016730.13 , HORVU5Hr1G016730.7 , HORVU5Hr1G016730.2 , HORVU5Hr1G016730.3 , HORVU5Hr1G016730.8 , HORVU5Hr1G016730.9 , HORVU4Hr1G066310.2 , HORVU4Hr1G066310.8 , HORVU4Hr1G066310.9 , HORVU3Hr1G064110.11 , HORVU3Hr1G064110.12 , HORVU3Hr1G064110.15 , HORVU3Hr1G064110.14 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1 , HORVU3Hr1G064110.9 , HORVU3Hr1G064110.8 , HORVU3Hr1G064110.5 , HORVU3Hr1G064110.7 , HORVU3Hr1G064110.6 , HORVU3Hr1G064110.1 , HORVU3Hr1G064110.3 , HORVU3Hr1G064110.2 , HORVU1Hr1G056600.3 , HORVU1Hr1G056600.1
Wheat TraesCS4A02G062000 , TraesCS6A02G225300 , TraesCS5A02G084200 , TraesCS6A02G225400 , TraesCS6B02G415100 , TraesCS6B02G256300 , TraesCS3D02G048000 , TraesCSU02G047400 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS5B02G089800 , TraesCS2A02G508700 , TraesCS4D02G238900 , TraesCS6D02G210100 , TraesCS7D02G318600 , TraesCS7D02G318600 , TraesCS3A02G122300 , TraesCS4B02G238700 , TraesCS5D02G096200 , TraesCS6D02G362200 , TraesCSU02G047400 , TraesCS5D02G073900 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3D02G262200 , TraesCS3D02G262200 , TraesCS2D02G346600 , TraesCS6D02G210200 , TraesCS1D02G242000 , TraesCS5B02G069900 , TraesCS2A02G348200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
2 Sobic.001G483700 Cupin domain containing protein, expressed -
3 Sobic.005G209800 nodulin, putative, expressed -
4 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
5 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
6 Sobic.003G142900 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
7 Sobic.008G023000 expressed protein -
8 Sobic.004G226300 expressed protein -
9 Sobic.001G527400 - -
10 Sobic.009G187500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MONOCULM 1, putative, expressed -
11 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
13 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
14 Sobic.002G048250 - -
15 Sobic.002G285525 - -
16 Sobic.001G137200 homeobox domain containing protein, expressed -
17 Sobic.009G088401 - -
18 Sobic.003G173032 - -
19 Sobic.003G290700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
20 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic005G098200 Sobic005G098200 Sobic003G104900 Sobic003G104900 Sobic005G098200--Sobic003G104900 Sobic001G483700 Sobic001G483700 Sobic005G098200--Sobic001G483700 Sobic005G209800 Sobic005G209800 Sobic005G098200--Sobic005G209800 Sobic005G231800 Sobic005G231800 Sobic005G098200--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic005G098200--Sobic008G002100 Sobic003G142900 Sobic003G142900 Sobic005G098200--Sobic003G142900 Sobic008G023000 Sobic008G023000 Sobic005G098200--Sobic008G023000 Sobic004G226300 Sobic004G226300 Sobic005G098200--Sobic004G226300 Sobic001G527400 Sobic001G527400 Sobic005G098200--Sobic001G527400 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic003G104900--Sobic008G002100 Sobic003G104900--Sobic008G023000 Sobic003G104900--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G104900--Sobic007G183000 Sobic003G104900--Sobic005G231800 Sobic003G104900--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic003G104900--Sobic006G171000 Sobic001G483700--Sobic004G226300 Sobic001G483700--Sobic007G183000 Sobic001G483700--Sobic005G209800 Sobic001G137200 Sobic001G137200 Sobic001G483700--Sobic001G137200 Sobic002G285525 Sobic002G285525 Sobic001G483700--Sobic002G285525 Sobic001G483700--Sobic001G527400 Sobic001G483700--Sobic008G002100 Sobic001G483700--Sobic003G104900 Sobic001G483700--Sobic008G023000 Sobic005G209800--Sobic008G002100 Sobic005G209800--Sobic008G023000 Sobic005G209800--Sobic001G527400 Sobic005G209800--Sobic007G183000 Sobic005G209800--Sobic004G226300 Sobic005G209800--Sobic005G231800 Sobic005G209800--Sobic006G171000 Sobic003G173032 Sobic003G173032 Sobic005G209800--Sobic003G173032 Sobic002G048250 Sobic002G048250 Sobic005G209800--Sobic002G048250 Sobic005G231800--Sobic008G023000 Sobic005G231800--Sobic001G527400 Sobic005G231800--Sobic008G002100 Sobic005G231800--Sobic007G183000 Sobic005G231800--Sobic004G226300 Sobic005G231800--Sobic005G209800 Sobic005G231800--Sobic002G048250 Sobic005G231800--Sobic003G173032 Sobic005G231800--Sobic006G171000 Sobic008G002100--Sobic008G023000 Sobic008G002100--Sobic001G527400 Sobic008G002100--Sobic005G209800 Sobic008G002100--Sobic007G183000 Sobic008G002100--Sobic004G226300 Sobic008G002100--Sobic005G231800 Sobic008G002100--Sobic003G173032 Sobic008G002100--Sobic002G048250 Sobic008G002100--Sobic006G171000 Sobic010G029200 Sobic010G029200 Sobic003G142900--Sobic010G029200 Sobic003G142900--Sobic008G023000 Sobic003G142900--Sobic008G002100 Sobic003G142900--Sobic001G527400 Sobic003G142900--Sobic004G226300 Sobic003G142900--Sobic007G183000 Sobic003G142900--Sobic005G209800 Sobic003G142900--Sobic003G173032 Sobic003G142900--Sobic005G231800 Sobic008G023000--Sobic008G002100 Sobic008G023000--Sobic001G527400 Sobic008G023000--Sobic007G183000 Sobic008G023000--Sobic005G209800 Sobic008G023000--Sobic004G226300 Sobic008G023000--Sobic003G173032 Sobic008G023000--Sobic005G231800 Sobic008G023000--Sobic002G048250 Sobic008G023000--Sobic006G171000 Sobic004G226300--Sobic007G183000 Sobic004G226300--Sobic001G527400 Sobic004G226300--Sobic008G023000 Sobic004G226300--Sobic008G002100 Sobic004G226300--Sobic002G048250 Sobic004G226300--Sobic005G231800 Sobic004G226300--Sobic005G209800 Sobic004G226300--Sobic006G171000 Sobic004G226300--Sobic003G173032 Sobic001G527400--Sobic008G023000 Sobic001G527400--Sobic008G002100 Sobic001G527400--Sobic007G183000 Sobic001G527400--Sobic004G226300 Sobic001G527400--Sobic002G048250 Sobic001G527400--Sobic005G209800 Sobic001G527400--Sobic005G231800 Sobic001G527400--Sobic003G173032 Sobic001G527400--Sobic006G171000
Octagon: transcription factors


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