Gene annotation
Transcriptome id Sobic.003G142900.1
Synonym Sb03g012356
Functional annotation chloroplast ATP synthase a chain precursor, putative, expressed
UniProt C5XI41
Pfam PF00119
Panther DB PTHR11410 PTHR11410:SF7
NCBI CDD -
KEGG Orthology K02108; ATPF0A, F-type H+-transporting ATPase subunit a
Gene Ontology GO:0015986; ATP synthesis coupled proton transport GO:0015078proton transmembrane transporter activity


Orthologs (automatic annotation)
TAIR ATCG00150 : ATPase, F0 complex, subunit A protein
RAP-DB (Rice) LOC_Os10g21236.1 : chloroplast ATP synthase a chain precursor, putative, expressed
MaizeGDB (Corn) Zm00025a057619 , Zm00025a044832 , Zm00025a057590 , Zm00025a041314
Brachypodium KQK12761 , PNT70413 , KQJ97800 , PNT75852 , KQJ84935
Barley HORVU0Hr1G028530.1 , HORVU7Hr1G005040.7 , HORVU7Hr1G005040.2 , HORVU0Hr1G036790.1 , HORVU4Hr1G045350.1 , HORVU6Hr1G049150.1 , HORVU6Hr1G049150.2 , HORVU0Hr1G033900.1 , HORVU0Hr1G024810.2 , HORVU0Hr1G024810.1 , AGP50749 , HORVU4Hr1G045380.6 , HORVU4Hr1G045380.7 , HORVU4Hr1G045380.4 , HORVU4Hr1G045380.3 , HORVU0Hr1G032740.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
2 Sobic.008G023000 expressed protein -
3 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
4 Sobic.001G527400 - -
5 Sobic.004G226300 expressed protein -
6 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.005G209800 nodulin, putative, expressed -
8 Sobic.003G173032 - -
9 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
10 Sobic.002G048250 - -
11 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
12 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
13 Sobic.004G224300 5-azacytidine resistance protein related, putative, expressed -
14 Sobic.002G285525 - -
15 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
16 Sobic.003G290700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
17 Sobic.005G156700 laccase precursor protein, putative, expressed -
18 Sobic.004G089700 - -
19 Sobic.010G002850 - -
20 Sobic.009G223700 - -


Gene co-expression network
sample Sobic003G142900 Sobic003G142900 Sobic010G029200 Sobic010G029200 Sobic003G142900--Sobic010G029200 Sobic008G023000 Sobic008G023000 Sobic003G142900--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic003G142900--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic003G142900--Sobic001G527400 Sobic004G226300 Sobic004G226300 Sobic003G142900--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic003G142900--Sobic007G183000 Sobic005G209800 Sobic005G209800 Sobic003G142900--Sobic005G209800 Sobic003G173032 Sobic003G173032 Sobic003G142900--Sobic003G173032 Sobic005G231800 Sobic005G231800 Sobic003G142900--Sobic005G231800 Sobic009G039400 Sobic009G039400 Sobic010G029200--Sobic009G039400 Sobic010G208300 Sobic010G208300 Sobic010G029200--Sobic010G208300 Sobic010G068300 Sobic010G068300 Sobic010G029200--Sobic010G068300 Sobic010G045300 Sobic010G045300 Sobic010G029200--Sobic010G045300 Sobic004G069600 Sobic004G069600 Sobic010G029200--Sobic004G069600 Sobic006G133650 Sobic006G133650 Sobic010G029200--Sobic006G133650 Sobic010G029200--Sobic003G142900 Sobic002G188100 Sobic002G188100 Sobic010G029200--Sobic002G188100 Sobic003G081400 Sobic003G081400 Sobic010G029200--Sobic003G081400 Sobic008G023000--Sobic008G002100 Sobic008G023000--Sobic001G527400 Sobic008G023000--Sobic007G183000 Sobic008G023000--Sobic005G209800 Sobic008G023000--Sobic004G226300 Sobic008G023000--Sobic003G173032 Sobic008G023000--Sobic005G231800 Sobic002G048250 Sobic002G048250 Sobic008G023000--Sobic002G048250 Sobic006G171000 Sobic006G171000 Sobic008G023000--Sobic006G171000 Sobic008G002100--Sobic008G023000 Sobic008G002100--Sobic001G527400 Sobic008G002100--Sobic005G209800 Sobic008G002100--Sobic007G183000 Sobic008G002100--Sobic004G226300 Sobic008G002100--Sobic005G231800 Sobic008G002100--Sobic003G173032 Sobic008G002100--Sobic002G048250 Sobic008G002100--Sobic006G171000 Sobic001G527400--Sobic008G023000 Sobic001G527400--Sobic008G002100 Sobic001G527400--Sobic007G183000 Sobic001G527400--Sobic004G226300 Sobic001G527400--Sobic002G048250 Sobic001G527400--Sobic005G209800 Sobic001G527400--Sobic005G231800 Sobic001G527400--Sobic003G173032 Sobic001G527400--Sobic006G171000 Sobic004G226300--Sobic007G183000 Sobic004G226300--Sobic001G527400 Sobic004G226300--Sobic008G023000 Sobic004G226300--Sobic008G002100 Sobic004G226300--Sobic002G048250 Sobic004G226300--Sobic005G231800 Sobic004G226300--Sobic005G209800 Sobic004G226300--Sobic006G171000 Sobic004G226300--Sobic003G173032 Sobic007G183000--Sobic004G226300 Sobic007G183000--Sobic001G527400 Sobic007G183000--Sobic002G048250 Sobic007G183000--Sobic008G023000 Sobic007G183000--Sobic008G002100 Sobic007G183000--Sobic005G231800 Sobic007G183000--Sobic005G209800 Sobic007G183000--Sobic003G173032 Sobic007G183000--Sobic006G171000 Sobic005G209800--Sobic008G002100 Sobic005G209800--Sobic008G023000 Sobic005G209800--Sobic001G527400 Sobic005G209800--Sobic007G183000 Sobic005G209800--Sobic004G226300 Sobic005G209800--Sobic005G231800 Sobic005G209800--Sobic006G171000 Sobic005G209800--Sobic003G173032 Sobic005G209800--Sobic002G048250 Sobic003G173032--Sobic008G023000 Sobic003G173032--Sobic008G002100 Sobic003G173032--Sobic001G527400 Sobic003G173032--Sobic007G183000 Sobic003G173032--Sobic004G226300 Sobic003G173032--Sobic005G209800 Sobic003G173032--Sobic005G231800 Sobic003G173032--Sobic002G048250 Sobic003G173032--Sobic006G171000 Sobic005G231800--Sobic008G023000 Sobic005G231800--Sobic001G527400 Sobic005G231800--Sobic008G002100 Sobic005G231800--Sobic007G183000 Sobic005G231800--Sobic004G226300 Sobic005G231800--Sobic005G209800 Sobic005G231800--Sobic002G048250 Sobic005G231800--Sobic003G173032 Sobic005G231800--Sobic006G171000
Octagon: transcription factors


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