Gene annotation
Transcriptome id Sobic.001G148600.1
Synonym Sb01g012930
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
hsp20/alpha crystallin family protein, putative, expressed
UniProt Q8W0Q8 , C5WQG7
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF151
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27140 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os03g45340.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a017206 , Zm00025a007556
Brachypodium KQK13903 , PNT74360 , PNT74359 , PNT74358 , PNT74351 , PNT74353 , PNT74352 , PNT74355 , PNT74354 , PNT74357 , PNT74356
Barley HORVU4Hr1G002290.4 , HORVU4Hr1G002290.3 , HORVU4Hr1G002290.2
Wheat TraesCS4D02G013100 , TraesCS4B02G014900 , TraesCS4A02G298600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G402701 - -
2 Sobic.008G031600 expressed protein -
3 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
4 Sobic.001G460700 expressed protein -
5 Sobic.010G161300 receptor-like kinase, putative, expressed -
6 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
7 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
9 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
10 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
11 Sobic.006G133650 - -
12 Sobic.010G122533 - -
13 Sobic.006G197000 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.003G142900 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
15 Sobic.010G179000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
17 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
18 Sobic.004G069600 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.003G283750 - -
20 Sobic.002G188100 - -


Gene co-expression network
sample Sobic001G148600 Sobic001G148600 Sobic001G402701 Sobic001G402701 Sobic001G148600--Sobic001G402701 Sobic008G031600 Sobic008G031600 Sobic001G148600--Sobic008G031600 Sobic003G201400 Sobic003G201400 Sobic001G148600--Sobic003G201400 Sobic001G460700 Sobic001G460700 Sobic001G148600--Sobic001G460700 Sobic010G161300 Sobic010G161300 Sobic001G148600--Sobic010G161300 Sobic010G029200 Sobic010G029200 Sobic001G148600--Sobic010G029200 Sobic010G045300 Sobic010G045300 Sobic001G148600--Sobic010G045300 Sobic010G208300 Sobic010G208300 Sobic001G148600--Sobic010G208300 Sobic003G081400 Sobic003G081400 Sobic001G148600--Sobic003G081400 Sobic001G402701--Sobic001G148600 Sobic010G259200 Sobic010G259200 Sobic001G402701--Sobic010G259200 Sobic003G083700 Sobic003G083700 Sobic001G402701--Sobic003G083700 Sobic007G206700 Sobic007G206700 Sobic001G402701--Sobic007G206700 Sobic003G104900 Sobic003G104900 Sobic001G402701--Sobic003G104900 Sobic010G002850 Sobic010G002850 Sobic001G402701--Sobic010G002850 Sobic003G390300 Sobic003G390300 Sobic001G402701--Sobic003G390300 Sobic010G119600 Sobic010G119600 Sobic001G402701--Sobic010G119600 Sobic003G142900 Sobic003G142900 Sobic001G402701--Sobic003G142900 Sobic008G031600--Sobic003G081400 Sobic008G031600--Sobic003G201400 Sobic008G031600--Sobic010G045300 Sobic008G031600--Sobic010G029200 Sobic010G122533 Sobic010G122533 Sobic008G031600--Sobic010G122533 Sobic009G039400 Sobic009G039400 Sobic008G031600--Sobic009G039400 Sobic008G031600--Sobic010G208300 Sobic005G022600 Sobic005G022600 Sobic008G031600--Sobic005G022600 Sobic006G167200 Sobic006G167200 Sobic008G031600--Sobic006G167200 Sobic010G114400 Sobic010G114400 Sobic003G201400--Sobic010G114400 Sobic002G156300 Sobic002G156300 Sobic003G201400--Sobic002G156300 Sobic010G224800 Sobic010G224800 Sobic003G201400--Sobic010G224800 Sobic009G031100 Sobic009G031100 Sobic003G201400--Sobic009G031100 Sobic003G109400 Sobic003G109400 Sobic003G201400--Sobic003G109400 Sobic006G197000 Sobic006G197000 Sobic003G201400--Sobic006G197000 Sobic007G001300 Sobic007G001300 Sobic003G201400--Sobic007G001300 Sobic006G172651 Sobic006G172651 Sobic003G201400--Sobic006G172651 Sobic003G201400--Sobic003G081400 Sobic001G460700--Sobic010G029200 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic001G460700--Sobic009G039400 Sobic001G460700--Sobic003G142900 Sobic010G068300 Sobic010G068300 Sobic001G460700--Sobic010G068300 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic001G460700--Sobic008G031600 Sobic010G161300--Sobic001G148600 Sobic004G128600 Sobic004G128600 Sobic010G161300--Sobic004G128600 Sobic010G161300--Sobic006G197000 Sobic010G161300--Sobic008G031600 Sobic010G161300--Sobic003G201400 Sobic005G226900 Sobic005G226900 Sobic010G161300--Sobic005G226900 Sobic010G014200 Sobic010G014200 Sobic010G161300--Sobic010G014200 Sobic006G278400 Sobic006G278400 Sobic010G161300--Sobic006G278400 Sobic004G227000 Sobic004G227000 Sobic010G161300--Sobic004G227000 Sobic010G029200--Sobic009G039400 Sobic010G029200--Sobic010G208300 Sobic010G029200--Sobic010G068300 Sobic010G029200--Sobic010G045300 Sobic004G069600 Sobic004G069600 Sobic010G029200--Sobic004G069600 Sobic010G029200--Sobic006G133650 Sobic010G029200--Sobic003G142900 Sobic002G188100 Sobic002G188100 Sobic010G029200--Sobic002G188100 Sobic010G029200--Sobic003G081400 Sobic010G045300--Sobic010G029200 Sobic010G045300--Sobic009G039400 Sobic010G045300--Sobic010G068300 Sobic010G045300--Sobic002G188100 Sobic010G045300--Sobic004G069600 Sobic010G045300--Sobic005G022600 Sobic010G045300--Sobic003G081400 Sobic010G045300--Sobic010G208300 Sobic010G045300--Sobic006G133650 Sobic010G208300--Sobic009G039400 Sobic010G208300--Sobic010G029200 Sobic010G208300--Sobic010G068300 Sobic010G208300--Sobic003G142900 Sobic010G208300--Sobic010G045300 Sobic010G208300--Sobic003G081400 Sobic010G208300--Sobic006G133650 Sobic010G208300--Sobic004G069600 Sobic010G208300--Sobic005G022600 Sobic003G081400--Sobic009G039400 Sobic003G081400--Sobic003G201400 Sobic003G081400--Sobic006G167200 Sobic003G081400--Sobic010G045300 Sobic003G081400--Sobic010G208300 Sobic003G081400--Sobic005G022600 Sobic003G081400--Sobic010G029200 Sobic003G081400--Sobic010G068300 Sobic003G081400--Sobic008G031600
Octagon: transcription factors


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