Gene annotation
Transcriptome id Sobic.001G460700.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QPR3
Pfam -
Panther DB PTHR38389 PTHR38389:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30845 : -
RAP-DB (Rice) LOC_Os03g11250.1 : expressed protein
MaizeGDB (Corn) Zm00025a053106
Brachypodium KQK22971
Barley HORVU4Hr1G068930.1 , HORVU4Hr1G068930.2
Wheat TraesCS4D02G251400 , TraesCS4B02G251400 , TraesCS4A02G053100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
2 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
3 Sobic.003G283750 - -
4 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
5 Sobic.003G142900 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
6 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
7 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
8 Sobic.006G133650 - -
9 Sobic.008G031600 expressed protein -
10 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
12 Sobic.004G069600 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.010G122533 - -
14 Sobic.002G188100 - -
15 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
16 Sobic.001G137200 homeobox domain containing protein, expressed -
17 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
18 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.002G285525 - -
20 Sobic.001G148600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -


Gene co-expression network
sample Sobic001G460700 Sobic001G460700 Sobic010G029200 Sobic010G029200 Sobic001G460700--Sobic010G029200 Sobic010G208300 Sobic010G208300 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic009G039400 Sobic009G039400 Sobic001G460700--Sobic009G039400 Sobic003G142900 Sobic003G142900 Sobic001G460700--Sobic003G142900 Sobic010G068300 Sobic010G068300 Sobic001G460700--Sobic010G068300 Sobic003G081400 Sobic003G081400 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic008G031600 Sobic008G031600 Sobic001G460700--Sobic008G031600 Sobic010G029200--Sobic009G039400 Sobic010G029200--Sobic010G208300 Sobic010G029200--Sobic010G068300 Sobic010G045300 Sobic010G045300 Sobic010G029200--Sobic010G045300 Sobic004G069600 Sobic004G069600 Sobic010G029200--Sobic004G069600 Sobic010G029200--Sobic006G133650 Sobic010G029200--Sobic003G142900 Sobic002G188100 Sobic002G188100 Sobic010G029200--Sobic002G188100 Sobic010G029200--Sobic003G081400 Sobic010G208300--Sobic009G039400 Sobic010G208300--Sobic010G029200 Sobic010G208300--Sobic010G068300 Sobic010G208300--Sobic003G142900 Sobic010G208300--Sobic010G045300 Sobic010G208300--Sobic003G081400 Sobic010G208300--Sobic006G133650 Sobic010G208300--Sobic004G069600 Sobic005G022600 Sobic005G022600 Sobic010G208300--Sobic005G022600 Sobic003G283750--Sobic010G029200 Sobic003G283750--Sobic003G142900 Sobic003G283750--Sobic001G460700 Sobic003G283750--Sobic010G208300 Sobic003G283750--Sobic009G039400 Sobic003G283750--Sobic010G068300 Sobic003G283750--Sobic003G081400 Sobic003G283750--Sobic010G045300 Sobic003G283750--Sobic005G022600 Sobic009G039400--Sobic010G208300 Sobic009G039400--Sobic010G029200 Sobic009G039400--Sobic006G133650 Sobic009G039400--Sobic010G045300 Sobic009G039400--Sobic003G081400 Sobic009G039400--Sobic004G069600 Sobic009G039400--Sobic002G188100 Sobic006G167200 Sobic006G167200 Sobic009G039400--Sobic006G167200 Sobic009G039400--Sobic010G068300 Sobic003G142900--Sobic010G029200 Sobic008G023000 Sobic008G023000 Sobic003G142900--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic003G142900--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic003G142900--Sobic001G527400 Sobic004G226300 Sobic004G226300 Sobic003G142900--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic003G142900--Sobic007G183000 Sobic005G209800 Sobic005G209800 Sobic003G142900--Sobic005G209800 Sobic003G173032 Sobic003G173032 Sobic003G142900--Sobic003G173032 Sobic005G231800 Sobic005G231800 Sobic003G142900--Sobic005G231800 Sobic010G068300--Sobic010G029200 Sobic010G068300--Sobic010G045300 Sobic010G068300--Sobic010G208300 Sobic010G068300--Sobic009G039400 Sobic010G068300--Sobic003G081400 Sobic010G068300--Sobic005G022600 Sobic010G068300--Sobic003G142900 Sobic010G068300--Sobic004G069600 Sobic010G068300--Sobic006G133650 Sobic003G081400--Sobic009G039400 Sobic003G201400 Sobic003G201400 Sobic003G081400--Sobic003G201400 Sobic003G081400--Sobic006G167200 Sobic003G081400--Sobic010G045300 Sobic003G081400--Sobic010G208300 Sobic003G081400--Sobic005G022600 Sobic003G081400--Sobic010G029200 Sobic003G081400--Sobic010G068300 Sobic003G081400--Sobic008G031600 Sobic006G133650--Sobic009G039400 Sobic006G133650--Sobic002G188100 Sobic006G133650--Sobic010G029200 Sobic006G133650--Sobic006G167200 Sobic006G133650--Sobic004G069600 Sobic006G133650--Sobic010G208300 Sobic006G133650--Sobic010G045300 Sobic010G122533 Sobic010G122533 Sobic006G133650--Sobic010G122533 Sobic006G133650--Sobic003G142900 Sobic008G031600--Sobic003G081400 Sobic008G031600--Sobic003G201400 Sobic008G031600--Sobic010G045300 Sobic008G031600--Sobic010G029200 Sobic008G031600--Sobic010G122533 Sobic008G031600--Sobic009G039400 Sobic008G031600--Sobic010G208300 Sobic008G031600--Sobic005G022600 Sobic008G031600--Sobic006G167200
Octagon: transcription factors


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