Gene annotation
Transcriptome id Sobic.006G197000.1
Synonym Sb06g026930, FP3, ATFP3
Functional annotation heavy-metal-associated domain-containing protein, putative, expressed
UniProt C5YEZ5
Pfam PF00403
Panther DB PTHR22814:SF99 PTHR22814
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29000 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os04g50020.1 : heavy-metal-associated domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010000
Brachypodium KQJ84294
Barley HORVU2Hr1G105870.1 , HORVU2Hr1G105870.3 , HORVU2Hr1G105870.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
2 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
3 Sobic.010G224800 patellin-5, putative, expressed -
4 Sobic.010G114400 expressed protein -
5 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.002G156300 - -
7 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
8 Sobic.003G109400 - -
9 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
10 Sobic.002G425900 expressed protein -
11 Sobic.008G061000 expressed protein -
12 Sobic.002G206200 monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
13 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
14 Sobic.004G330400 expressed protein -
15 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
16 Sobic.006G172651 - -
17 Sobic.K044200 - -
18 Sobic.009G163500 - -
19 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.004G197300 - -


Gene co-expression network
sample Sobic006G197000 Sobic006G197000 Sobic004G128600 Sobic004G128600 Sobic006G197000--Sobic004G128600 Sobic003G201400 Sobic003G201400 Sobic006G197000--Sobic003G201400 Sobic010G224800 Sobic010G224800 Sobic006G197000--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic006G197000--Sobic010G114400 Sobic007G001300 Sobic007G001300 Sobic006G197000--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic006G197000--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic006G197000--Sobic009G031100 Sobic003G109400 Sobic003G109400 Sobic006G197000--Sobic003G109400 Sobic001G200500 Sobic001G200500 Sobic006G197000--Sobic001G200500 Sobic004G128600--Sobic006G197000 Sobic002G425900 Sobic002G425900 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic004G128600--Sobic010G114400 Sobic009G154000 Sobic009G154000 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic004G128600--Sobic003G201400 Sobic004G128600--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G128600--Sobic005G102100 Sobic003G201400--Sobic010G114400 Sobic003G201400--Sobic002G156300 Sobic003G201400--Sobic010G224800 Sobic003G201400--Sobic009G031100 Sobic003G201400--Sobic003G109400 Sobic003G201400--Sobic006G197000 Sobic003G201400--Sobic007G001300 Sobic006G172651 Sobic006G172651 Sobic003G201400--Sobic006G172651 Sobic003G081400 Sobic003G081400 Sobic003G201400--Sobic003G081400 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic010G224800--Sobic002G156300 Sobic010G224800--Sobic009G031100 Sobic010G224800--Sobic002G425900 Sobic003G105300 Sobic003G105300 Sobic010G224800--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic010G224800--Sobic004G197300 Sobic009G163500 Sobic009G163500 Sobic010G224800--Sobic009G163500 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic007G001300--Sobic002G156300 Sobic007G001300--Sobic010G224800 Sobic007G001300--Sobic010G114400 Sobic007G001300--Sobic003G109400 Sobic007G001300--Sobic009G031100 Sobic007G001300--Sobic004G197300 Sobic007G001300--Sobic003G105300 Sobic008G020300 Sobic008G020300 Sobic007G001300--Sobic008G020300 Sobic010G179150 Sobic010G179150 Sobic007G001300--Sobic010G179150 Sobic002G156300--Sobic007G001300 Sobic002G156300--Sobic003G109400 Sobic002G156300--Sobic010G114400 Sobic002G156300--Sobic010G224800 Sobic002G156300--Sobic009G031100 Sobic002G156300--Sobic003G105300 Sobic002G156300--Sobic004G197300 Sobic002G156300--Sobic008G020300 Sobic002G156300--Sobic009G163500 Sobic009G031100--Sobic002G156300 Sobic009G031100--Sobic007G001300 Sobic009G031100--Sobic010G224800 Sobic009G031100--Sobic010G114400 Sobic009G031100--Sobic003G109400 Sobic010G114500 Sobic010G114500 Sobic009G031100--Sobic010G114500 Sobic009G031100--Sobic003G105300 Sobic002G206200 Sobic002G206200 Sobic009G031100--Sobic002G206200 Sobic009G031100--Sobic004G197300 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300 Sobic008G133100 Sobic008G133100 Sobic001G200500--Sobic008G133100 Sobic001G200500--Sobic010G224800 Sobic001G200500--Sobic007G001300 Sobic001G200500--Sobic009G031100 Sobic001G255700 Sobic001G255700 Sobic001G200500--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic001G200500--Sobic002G284800 Sobic001G200500--Sobic003G109400 Sobic001G200500--Sobic002G156300 Sobic003G368150 Sobic003G368150 Sobic001G200500--Sobic003G368150
Octagon: transcription factors


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