Gene annotation
Transcriptome id Sobic.001G541900.3,Sobic.001G541900.2,Sobic.001G541900.4
Synonym Sb01g050410, CHL1, NRT1, ATNRT1, NRT1.1, CHL1-1, B-1
Functional annotation "similar to Nitrate/chlorate transporter, putative, expressed" (PubMedID : 29862293)
peptide transporter PTR2, putative, expressed
UniProt C5WMU8
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF142
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G12110 : nitrate transporter 1.1
RAP-DB (Rice) LOC_Os10g40600.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a055174 , Zm00025a028806 , Zm00025a003351 , Zm00025a036455 , Zm00025a000114
Brachypodium KQJ97753 , KQJ97754 , KQJ95347
Barley HORVU7Hr1G071600.9 , HORVU7Hr1G071600.8 , HORVU7Hr1G071600.3 , HORVU7Hr1G071600.2 , HORVU7Hr1G071600.1 , HORVU7Hr1G071600.7 , HORVU7Hr1G071600.6 , HORVU7Hr1G071600.5 , HORVU7Hr1G071600.4 , HORVU4Hr1G088020.12 , HORVU4Hr1G088020.13 , HORVU4Hr1G088020.4 , HORVU4Hr1G088020.5 , HORVU4Hr1G088020.6 , HORVU4Hr1G088020.7 , HORVU4Hr1G088020.1 , HORVU4Hr1G088020.2 , HORVU4Hr1G088020.3 , HORVU4Hr1G088020.8 , HORVU4Hr1G088020.9 , HORVU4Hr1G088020.10 , HORVU4Hr1G088020.11 , HORVU1Hr1G053990.10 , HORVU7Hr1G071600.11 , HORVU7Hr1G071600.10 , HORVU1Hr1G054020.4 , HORVU1Hr1G054020.5 , HORVU1Hr1G054020.2 , HORVU1Hr1G054020.3 , HORVU1Hr1G053990.1 , HORVU1Hr1G053990.2 , HORVU1Hr1G053990.5 , HORVU1Hr1G053990.4 , HORVU1Hr1G053990.7 , HORVU1Hr1G053990.6 , HORVU1Hr1G053990.9 , HORVU1Hr1G053990.8
Wheat TraesCS7D02G297000 , TraesCS1B02G224900 , TraesCS7B02G201900 , TraesCS4B02G375800 , TraesCS1A02G211000 , TraesCS5A02G537100 , TraesCS1A02G210900 , TraesCS7A02G301700 , TraesCS1D02G214300 , TraesCS1D02G214200 , TraesCS4B02G371000 , TraesCS1B02G225000 , TraesCS4D02G361500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
2 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
4 Sobic.009G163500 - -
5 Sobic.004G354800 - -
6 Sobic.003G105300 - -
7 Sobic.004G197300 - -
8 Sobic.001G255700 - -
9 Sobic.009G082400 - -
10 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.003G136700 - -
12 Sobic.003G368150 - -
13 Sobic.008G131800 zinc knuckle family protein, expressed -
14 Sobic.010G179150 - -
15 Sobic.003G109400 - -
16 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
17 Sobic.004G251350 - -
18 Sobic.002G284800 expressed protein -
19 Sobic.009G152901 - -
20 Sobic.010G224800 patellin-5, putative, expressed -


Gene co-expression network
sample Sobic001G541900 Sobic001G541900 Sobic001G407000 Sobic001G407000 Sobic001G541900--Sobic001G407000 Sobic008G020300 Sobic008G020300 Sobic001G541900--Sobic008G020300 Sobic001G537900 Sobic001G537900 Sobic001G541900--Sobic001G537900 Sobic009G163500 Sobic009G163500 Sobic001G541900--Sobic009G163500 Sobic004G354800 Sobic004G354800 Sobic001G541900--Sobic004G354800 Sobic003G105300 Sobic003G105300 Sobic001G541900--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic001G541900--Sobic004G197300 Sobic001G255700 Sobic001G255700 Sobic001G541900--Sobic001G255700 Sobic009G082400 Sobic009G082400 Sobic001G541900--Sobic009G082400 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic008G020300--Sobic001G537900 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic008G020300--Sobic001G255700 Sobic008G020300--Sobic009G163500 Sobic008G020300--Sobic004G197300 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic001G537900--Sobic008G020300 Sobic001G120100 Sobic001G120100 Sobic001G537900--Sobic001G120100 Sobic010G179150 Sobic010G179150 Sobic001G537900--Sobic010G179150 Sobic001G537900--Sobic004G354800 Sobic004G251350 Sobic004G251350 Sobic001G537900--Sobic004G251350 Sobic001G537900--Sobic004G197300 Sobic001G537900--Sobic009G163500 Sobic003G008850 Sobic003G008850 Sobic001G537900--Sobic003G008850 Sobic007G111600 Sobic007G111600 Sobic001G537900--Sobic007G111600 Sobic009G163500--Sobic004G354800 Sobic009G163500--Sobic003G109400 Sobic009G163500--Sobic001G255700 Sobic008G131800 Sobic008G131800 Sobic009G163500--Sobic008G131800 Sobic009G163500--Sobic004G197300 Sobic009G163500--Sobic003G368150 Sobic009G163500--Sobic010G179150 Sobic009G163500--Sobic001G537900 Sobic009G163500--Sobic002G284800 Sobic004G354800--Sobic009G163500 Sobic004G354800--Sobic001G537900 Sobic004G354800--Sobic003G109400 Sobic004G354800--Sobic008G020300 Sobic003G136700 Sobic003G136700 Sobic004G354800--Sobic003G136700 Sobic004G354800--Sobic004G197300 Sobic004G354800--Sobic008G131800 Sobic009G152901 Sobic009G152901 Sobic004G354800--Sobic009G152901 Sobic004G354800--Sobic001G255700 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic003G105300--Sobic001G255700 Sobic003G105300--Sobic002G284800 Sobic003G105300--Sobic003G368150 Sobic003G105300--Sobic009G163500 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic003G105300--Sobic001G537900 Sobic004G197300--Sobic010G179150 Sobic004G197300--Sobic003G368150 Sobic004G197300--Sobic001G255700 Sobic004G197300--Sobic007G001300 Sobic004G197300--Sobic002G284800 Sobic004G197300--Sobic008G131800 Sobic004G197300--Sobic009G163500 Sobic004G197300--Sobic001G537900 Sobic004G197300--Sobic003G109400 Sobic001G255700--Sobic002G284800 Sobic001G255700--Sobic003G368150 Sobic001G255700--Sobic008G131800 Sobic004G239000 Sobic004G239000 Sobic001G255700--Sobic004G239000 Sobic008G133100 Sobic008G133100 Sobic001G255700--Sobic008G133100 Sobic001G255700--Sobic003G105300 Sobic001G255700--Sobic004G197300 Sobic001G255700--Sobic010G179150 Sobic001G255700--Sobic009G163500 Sobic009G082400--Sobic004G251350 Sobic005G076100 Sobic005G076100 Sobic009G082400--Sobic005G076100 Sobic009G082400--Sobic001G537900 Sobic004G016600 Sobic004G016600 Sobic009G082400--Sobic004G016600 Sobic007G204500 Sobic007G204500 Sobic009G082400--Sobic007G204500 Sobic001G481201 Sobic001G481201 Sobic009G082400--Sobic001G481201 Sobic008G119000 Sobic008G119000 Sobic009G082400--Sobic008G119000 Sobic009G085600 Sobic009G085600 Sobic009G082400--Sobic009G085600 Sobic009G082400--Sobic004G354800
Octagon: transcription factors


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