Gene annotation
Transcriptome id Sobic.008G020300.1
Synonym ATMYB30, MYB30, Sb08g001800
Functional annotation myb-like DNA-binding domain containing protein, putative, expressed
UniProt A0A1B6PAU1 , Q6URU1
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF614
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08810 : myb domain protein 60
RAP-DB (Rice) LOC_Os11g03440.1 : myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a052072 , Zm00025a053742 , Zm00025a005909 , Zm00025a050283 , Zm00025a053739 , Zm00025a032982 , Zm00025a051300 , Zm00025a051301 , Zm00025a048846 , Zm00025a034111 , Zm00025a033367 , Zm00025a013472 , Zm00025a058060 , Zm00025a056901
Brachypodium KQK21499 , KQJ88197 , KQK02077 , KQJ89518 , KQK20023 , KQK20025 , KQK20024 , KQK20026 , KQJ92481 , PNT76712 , PNT76711 , KQJ98451 , KQJ91657 , KQK15086 , KQJ84313 , KQK19995 , PNT77324 , KQJ90229 , PNT76695
Barley HORVU2Hr1G028470.3 , HORVU2Hr1G028470.2 , HORVU2Hr1G028470.1 , HORVU2Hr1G028470.7 , HORVU2Hr1G028470.6 , HORVU2Hr1G028470.5 , HORVU2Hr1G028470.4 , HORVU2Hr1G120340.21 , HORVU2Hr1G120340.20 , HORVU2Hr1G120340.23 , HORVU2Hr1G120340.22 , HORVU2Hr1G120340.25 , HORVU2Hr1G120340.24 , HORVU2Hr1G120340.26 , HORVU2Hr1G120340.29 , HORVU2Hr1G120340.28 , HORVU6Hr1G083250.1 , HORVU6Hr1G083250.2 , HORVU6Hr1G083250.3 , HORVU2Hr1G106140.1 , HORVU2Hr1G106140.2 , HORVU2Hr1G106140.3 , HORVU5Hr1G045550.10 , HORVU2Hr1G120340.36 , HORVU2Hr1G120340.37 , HORVU2Hr1G120340.34 , HORVU2Hr1G120340.35 , HORVU2Hr1G120340.32 , HORVU2Hr1G120340.33 , HORVU2Hr1G120340.30 , HORVU2Hr1G120340.38 , HORVU2Hr1G120340.39 , HORVU4Hr1G023510.3 , HORVU4Hr1G023510.2 , HORVU4Hr1G023510.1 , HORVU4Hr1G023510.7 , HORVU4Hr1G023510.6 , HORVU4Hr1G023510.5 , HORVU4Hr1G023510.4 , HORVU4Hr1G023510.8 , HORVU2Hr1G120340.43 , HORVU2Hr1G120340.42 , HORVU2Hr1G120340.41 , HORVU2Hr1G120340.40 , HORVU2Hr1G120340.47 , HORVU2Hr1G120340.46 , HORVU2Hr1G120340.45 , HORVU2Hr1G120340.48 , HORVU2Hr1G120340.50 , HORVU2Hr1G120340.51 , HORVU2Hr1G120340.52 , HORVU2Hr1G120340.53 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU7Hr1G003590.2 , HORVU7Hr1G003590.1 , HORVU5Hr1G045550.8 , HORVU5Hr1G045550.9 , HORVU5Hr1G045550.2 , HORVU5Hr1G045550.3 , HORVU5Hr1G045550.1 , HORVU5Hr1G045550.6 , HORVU5Hr1G045550.7 , HORVU5Hr1G045550.4 , HORVU5Hr1G045550.5 , HORVU2Hr1G120340.18 , HORVU2Hr1G120340.19 , HORVU2Hr1G120340.14 , HORVU2Hr1G120340.15 , HORVU2Hr1G120340.16 , HORVU2Hr1G120340.17 , HORVU2Hr1G120340.11 , HORVU2Hr1G120340.12 , HORVU2Hr1G120340.13 , HORVU2Hr1G120340.6 , HORVU2Hr1G120340.7 , HORVU2Hr1G120340.4 , HORVU2Hr1G120340.5 , HORVU2Hr1G120340.2 , HORVU2Hr1G120340.3 , HORVU2Hr1G120340.1 , HORVU2Hr1G120340.8 , HORVU5Hr1G123880.2 , HORVU5Hr1G123880.1 , HORVU5Hr1G045540.1 , HORVU5Hr1G045540.3 , HORVU5Hr1G045540.2 , HORVU5Hr1G045540.5 , HORVU5Hr1G045540.4 , HORVU5Hr1G045540.6
Wheat TraesCS2B02G343800 , TraesCS4A02G459200 , TraesCS6A02G344700 , TraesCS5B02G141200 , TraesCS4D02G123300 , TraesCS5B02G556300 , TraesCS4B02G129100 , TraesCS2A02G552400 , TraesCS5D02G326600 , TraesCS5D02G149600 , TraesCS7A02G030600 , TraesCS2D02G163700 , TraesCS5A02G227400 , TraesCS5D02G234800 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS5B02G320800 , TraesCS2B02G583800 , TraesCS6B02G377400 , TraesCS5D02G552200 , TraesCS7A02G030800 , TraesCS2A02G069300 , TraesCS7A02G021800 , TraesCS5A02G320500 , TraesCS2A02G157600 , TraesCS6D02G327300 , TraesCS5B02G226100 , TraesCS5A02G142500 , TraesCS4A02G189700 , TraesCS2B02G183100 , TraesCS4D02G359100 , TraesCS2D02G324800 , TraesCS4A02G322200 , TraesCS2A02G447100 , TraesCS2D02G068000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
2 Sobic.003G105300 - -
3 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
4 Sobic.003G109400 - -
5 Sobic.001G255700 - -
6 Sobic.009G163500 - -
7 Sobic.004G197300 - -
8 Sobic.004G354800 - -
9 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.002G156300 - -
11 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
12 Sobic.010G179150 - -
13 Sobic.010G224800 patellin-5, putative, expressed -
14 Sobic.002G284800 expressed protein -
15 Sobic.003G008850 - -
16 Sobic.003G368150 - -
17 Sobic.008G131800 zinc knuckle family protein, expressed -
18 Sobic.009G152901 - -
19 Sobic.010G114400 expressed protein -
20 Sobic.004G239000 - -


Gene co-expression network
sample Sobic008G020300 Sobic008G020300 Sobic001G537900 Sobic001G537900 Sobic008G020300--Sobic001G537900 Sobic003G105300 Sobic003G105300 Sobic008G020300--Sobic003G105300 Sobic001G407000 Sobic001G407000 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic001G255700 Sobic001G255700 Sobic008G020300--Sobic001G255700 Sobic009G163500 Sobic009G163500 Sobic008G020300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic008G020300--Sobic004G197300 Sobic004G354800 Sobic004G354800 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic001G537900--Sobic008G020300 Sobic001G120100 Sobic001G120100 Sobic001G537900--Sobic001G120100 Sobic010G179150 Sobic010G179150 Sobic001G537900--Sobic010G179150 Sobic001G537900--Sobic004G354800 Sobic004G251350 Sobic004G251350 Sobic001G537900--Sobic004G251350 Sobic001G537900--Sobic004G197300 Sobic001G537900--Sobic009G163500 Sobic003G008850 Sobic003G008850 Sobic001G537900--Sobic003G008850 Sobic007G111600 Sobic007G111600 Sobic001G537900--Sobic007G111600 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic003G105300--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic003G105300--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic003G105300--Sobic003G368150 Sobic003G105300--Sobic009G163500 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic003G105300--Sobic001G537900 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G541900 Sobic001G541900 Sobic001G407000--Sobic001G541900 Sobic001G407000--Sobic002G284800 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic002G156300 Sobic002G156300 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic010G114400 Sobic010G114400 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic009G031100 Sobic009G031100 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic002G206200 Sobic002G206200 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300 Sobic001G255700--Sobic002G284800 Sobic001G255700--Sobic003G368150 Sobic008G131800 Sobic008G131800 Sobic001G255700--Sobic008G131800 Sobic004G239000 Sobic004G239000 Sobic001G255700--Sobic004G239000 Sobic008G133100 Sobic008G133100 Sobic001G255700--Sobic008G133100 Sobic001G255700--Sobic003G105300 Sobic001G255700--Sobic004G197300 Sobic001G255700--Sobic010G179150 Sobic001G255700--Sobic009G163500 Sobic009G163500--Sobic004G354800 Sobic009G163500--Sobic003G109400 Sobic009G163500--Sobic001G255700 Sobic009G163500--Sobic008G131800 Sobic009G163500--Sobic004G197300 Sobic009G163500--Sobic003G368150 Sobic009G163500--Sobic010G179150 Sobic009G163500--Sobic001G537900 Sobic009G163500--Sobic002G284800 Sobic004G197300--Sobic010G179150 Sobic004G197300--Sobic003G368150 Sobic004G197300--Sobic001G255700 Sobic004G197300--Sobic007G001300 Sobic004G197300--Sobic002G284800 Sobic004G197300--Sobic008G131800 Sobic004G197300--Sobic009G163500 Sobic004G197300--Sobic001G537900 Sobic004G197300--Sobic003G109400 Sobic004G354800--Sobic009G163500 Sobic004G354800--Sobic001G537900 Sobic004G354800--Sobic003G109400 Sobic004G354800--Sobic008G020300 Sobic003G136700 Sobic003G136700 Sobic004G354800--Sobic003G136700 Sobic004G354800--Sobic004G197300 Sobic004G354800--Sobic008G131800 Sobic009G152901 Sobic009G152901 Sobic004G354800--Sobic009G152901 Sobic004G354800--Sobic001G255700 Sobic007G001300--Sobic002G156300 Sobic007G001300--Sobic010G224800 Sobic007G001300--Sobic010G114400 Sobic007G001300--Sobic003G109400 Sobic007G001300--Sobic009G031100 Sobic007G001300--Sobic004G197300 Sobic007G001300--Sobic003G105300 Sobic007G001300--Sobic008G020300 Sobic007G001300--Sobic010G179150
Octagon: transcription factors


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