Gene annotation
Transcriptome id Sobic.002G156300.1
Synonym
Functional annotation -
UniProt A0A1B6QBN1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.003G109400 - -
3 Sobic.010G114400 expressed protein -
4 Sobic.010G224800 patellin-5, putative, expressed -
5 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
6 Sobic.003G105300 - -
7 Sobic.004G197300 - -
8 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.009G163500 - -
10 Sobic.002G206200 monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
11 Sobic.006G172651 - -
12 Sobic.010G179150 - -
13 Sobic.002G425900 expressed protein -
14 Sobic.001G255700 - -
15 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
16 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
17 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
18 Sobic.004G330400 expressed protein -
19 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
20 Sobic.001G145300 - -


Gene co-expression network
sample Sobic002G156300 Sobic002G156300 Sobic007G001300 Sobic007G001300 Sobic002G156300--Sobic007G001300 Sobic003G109400 Sobic003G109400 Sobic002G156300--Sobic003G109400 Sobic010G114400 Sobic010G114400 Sobic002G156300--Sobic010G114400 Sobic010G224800 Sobic010G224800 Sobic002G156300--Sobic010G224800 Sobic009G031100 Sobic009G031100 Sobic002G156300--Sobic009G031100 Sobic003G105300 Sobic003G105300 Sobic002G156300--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic002G156300--Sobic004G197300 Sobic008G020300 Sobic008G020300 Sobic002G156300--Sobic008G020300 Sobic009G163500 Sobic009G163500 Sobic002G156300--Sobic009G163500 Sobic007G001300--Sobic002G156300 Sobic007G001300--Sobic010G224800 Sobic007G001300--Sobic010G114400 Sobic007G001300--Sobic003G109400 Sobic007G001300--Sobic009G031100 Sobic007G001300--Sobic004G197300 Sobic007G001300--Sobic003G105300 Sobic007G001300--Sobic008G020300 Sobic010G179150 Sobic010G179150 Sobic007G001300--Sobic010G179150 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic002G206200 Sobic002G206200 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic002G425900 Sobic002G425900 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic010G224800--Sobic002G156300 Sobic010G224800--Sobic009G031100 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic010G224800--Sobic009G163500 Sobic009G031100--Sobic002G156300 Sobic009G031100--Sobic007G001300 Sobic009G031100--Sobic010G224800 Sobic009G031100--Sobic010G114400 Sobic009G031100--Sobic003G109400 Sobic010G114500 Sobic010G114500 Sobic009G031100--Sobic010G114500 Sobic009G031100--Sobic003G105300 Sobic009G031100--Sobic002G206200 Sobic009G031100--Sobic004G197300 Sobic001G407000 Sobic001G407000 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic001G255700 Sobic001G255700 Sobic003G105300--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic003G105300--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic003G105300--Sobic003G368150 Sobic003G105300--Sobic009G163500 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic001G537900 Sobic001G537900 Sobic003G105300--Sobic001G537900 Sobic004G197300--Sobic010G179150 Sobic004G197300--Sobic003G368150 Sobic004G197300--Sobic001G255700 Sobic004G197300--Sobic007G001300 Sobic004G197300--Sobic002G284800 Sobic008G131800 Sobic008G131800 Sobic004G197300--Sobic008G131800 Sobic004G197300--Sobic009G163500 Sobic004G197300--Sobic001G537900 Sobic004G197300--Sobic003G109400 Sobic008G020300--Sobic001G537900 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic008G020300--Sobic003G109400 Sobic008G020300--Sobic001G255700 Sobic008G020300--Sobic009G163500 Sobic008G020300--Sobic004G197300 Sobic004G354800 Sobic004G354800 Sobic008G020300--Sobic004G354800 Sobic008G020300--Sobic007G001300 Sobic009G163500--Sobic004G354800 Sobic009G163500--Sobic003G109400 Sobic009G163500--Sobic001G255700 Sobic009G163500--Sobic008G131800 Sobic009G163500--Sobic004G197300 Sobic009G163500--Sobic003G368150 Sobic009G163500--Sobic010G179150 Sobic009G163500--Sobic001G537900 Sobic009G163500--Sobic002G284800
Octagon: transcription factors


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