Gene annotation
Transcriptome id Sobic.009G031100.1,Sobic.009G031100.2
Synonym CPI1
Functional annotation cycloeucalenol cycloisomerase, putative, expressed
UniProt C5YZH1 , A0A1Z5R0S3
Pfam -
Panther DB PTHR35136 PTHR35136:SF1
NCBI CDD -
KEGG Orthology K08246; cycloeucalenol cycloisomerase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50375 : cyclopropyl isomerase
RAP-DB (Rice) LOC_Os11g19700.1 : cycloeucalenol cycloisomerase, putative, expressed
MaizeGDB (Corn) Zm00025a040755
Brachypodium KQJ88644 , PNT63703
Barley HORVU5Hr1G114900.1 , HORVU5Hr1G114900.2 , HORVU5Hr1G114900.3 , HORVU5Hr1G114900.4 , HORVU5Hr1G114900.5 , HORVU5Hr1G114900.6 , HORVU5Hr1G114900.7 , HORVU5Hr1G114900.8 , HORVU5Hr1G114900.9 , HORVU5Hr1G114900.10 , HORVU5Hr1G114900.11 , HORVU4Hr1G012440.1 , HORVU4Hr1G012440.3 , HORVU4Hr1G012440.2
Wheat TraesCS4B02G074800 , TraesCS6B02G381100 , TraesCS6A02G347600 , TraesCS6D02G330700 , TraesCS4D02G073400 , TraesCS4D02G073400 , TraesCS4D02G073400 , TraesCS4A02G240100 , TraesCS4A02G240100 , TraesCS5D02G501500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G156300 - -
2 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.010G224800 patellin-5, putative, expressed -
4 Sobic.010G114400 expressed protein -
5 Sobic.003G109400 - -
6 Sobic.010G114500 tetraspanin family protein, putative, expressed -
7 Sobic.003G105300 - -
8 Sobic.002G206200 monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
9 Sobic.004G197300 - -
10 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
11 Sobic.009G163500 - -
12 Sobic.002G425900 expressed protein -
13 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.001G255700 - -
16 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
17 Sobic.006G172651 - -
18 Sobic.002G284800 expressed protein -
19 Sobic.004G330400 expressed protein -
20 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G031100 Sobic009G031100 Sobic002G156300 Sobic002G156300 Sobic009G031100--Sobic002G156300 Sobic007G001300 Sobic007G001300 Sobic009G031100--Sobic007G001300 Sobic010G224800 Sobic010G224800 Sobic009G031100--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic009G031100--Sobic010G114400 Sobic003G109400 Sobic003G109400 Sobic009G031100--Sobic003G109400 Sobic010G114500 Sobic010G114500 Sobic009G031100--Sobic010G114500 Sobic003G105300 Sobic003G105300 Sobic009G031100--Sobic003G105300 Sobic002G206200 Sobic002G206200 Sobic009G031100--Sobic002G206200 Sobic004G197300 Sobic004G197300 Sobic009G031100--Sobic004G197300 Sobic002G156300--Sobic007G001300 Sobic002G156300--Sobic003G109400 Sobic002G156300--Sobic010G114400 Sobic002G156300--Sobic010G224800 Sobic002G156300--Sobic009G031100 Sobic002G156300--Sobic003G105300 Sobic002G156300--Sobic004G197300 Sobic008G020300 Sobic008G020300 Sobic002G156300--Sobic008G020300 Sobic009G163500 Sobic009G163500 Sobic002G156300--Sobic009G163500 Sobic007G001300--Sobic002G156300 Sobic007G001300--Sobic010G224800 Sobic007G001300--Sobic010G114400 Sobic007G001300--Sobic003G109400 Sobic007G001300--Sobic009G031100 Sobic007G001300--Sobic004G197300 Sobic007G001300--Sobic003G105300 Sobic007G001300--Sobic008G020300 Sobic010G179150 Sobic010G179150 Sobic007G001300--Sobic010G179150 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic010G224800--Sobic002G156300 Sobic010G224800--Sobic009G031100 Sobic002G425900 Sobic002G425900 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic010G224800--Sobic009G163500 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300 Sobic010G114500--Sobic009G031100 Sobic010G114500--Sobic007G001300 Sobic010G114500--Sobic002G156300 Sobic010G114500--Sobic003G109400 Sobic010G114500--Sobic010G224800 Sobic010G114500--Sobic010G114400 Sobic010G114500--Sobic003G105300 Sobic010G114500--Sobic004G197300 Sobic010G114500--Sobic009G163500 Sobic001G407000 Sobic001G407000 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic001G255700 Sobic001G255700 Sobic003G105300--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic003G105300--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic003G105300--Sobic003G368150 Sobic003G105300--Sobic009G163500 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic001G537900 Sobic001G537900 Sobic003G105300--Sobic001G537900 Sobic002G206200--Sobic003G109400 Sobic002G206200--Sobic002G156300 Sobic006G172651 Sobic006G172651 Sobic002G206200--Sobic006G172651 Sobic002G206200--Sobic010G224800 Sobic002G206200--Sobic009G031100 Sobic002G206200--Sobic009G163500 Sobic002G206200--Sobic007G001300 Sobic002G206200--Sobic010G114400 Sobic001G261440 Sobic001G261440 Sobic002G206200--Sobic001G261440 Sobic004G197300--Sobic010G179150 Sobic004G197300--Sobic003G368150 Sobic004G197300--Sobic001G255700 Sobic004G197300--Sobic007G001300 Sobic004G197300--Sobic002G284800 Sobic008G131800 Sobic008G131800 Sobic004G197300--Sobic008G131800 Sobic004G197300--Sobic009G163500 Sobic004G197300--Sobic001G537900 Sobic004G197300--Sobic003G109400
Octagon: transcription factors


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