Gene annotation
Transcriptome id Sobic.008G083300.1
Synonym Sb08g008310
Functional annotation expressed protein
UniProt C5YU01
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27008 PTHR27008:SF9
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G67510 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os12g13300.1 : expressed protein
MaizeGDB (Corn) Zm00025a054541 , Zm00025a012607
Brachypodium KQJ88647 , KQJ91772 , PNT63706 , PNT63704 , PNT63705
Barley HORVU3Hr1G007120.4 , HORVU3Hr1G007120.3 , HORVU3Hr1G007120.2 , HORVU3Hr1G007120.1 , HORVU4Hr1G012420.3 , HORVU4Hr1G012420.2 , HORVU4Hr1G012420.6 , HORVU4Hr1G012420.5 , HORVU4Hr1G012420.4 , HORVU2Hr1G102790.5 , HORVU2Hr1G102790.4 , HORVU2Hr1G102790.7 , HORVU2Hr1G102790.6 , HORVU2Hr1G102790.1 , HORVU2Hr1G102790.3 , HORVU2Hr1G102790.2
Wheat TraesCS3A02G037200 , TraesCS3D02G042500 , TraesCS2D02G443200 , TraesCS4B02G074700 , TraesCS4A02G240200 , TraesCS2B02G465200 , TraesCS4D02G073300 , TraesCS2A02G444000 , TraesCS2A02G444000 , TraesCS3B02G046700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G009900 expressed protein -
2 Sobic.009G206800 WRKY23, expressed -
3 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
4 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.004G007800 protein kinase, putative, expressed -
6 Sobic.001G008400 brevis radix, putative, expressed -
7 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -
8 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
9 Sobic.006G003000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.010G161300 receptor-like kinase, putative, expressed -
11 Sobic.001G331100 expressed protein -
12 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
14 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
15 Sobic.008G183500 - -
16 Sobic.002G005300 dirigent, putative, expressed -
17 Sobic.002G139200 transferase family protein, putative, expressed -
18 Sobic.008G178901 - -
19 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
20 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G083300 Sobic008G083300 Sobic006G009900 Sobic006G009900 Sobic008G083300--Sobic006G009900 Sobic009G206800 Sobic009G206800 Sobic008G083300--Sobic009G206800 Sobic003G300100 Sobic003G300100 Sobic008G083300--Sobic003G300100 Sobic002G279300 Sobic002G279300 Sobic008G083300--Sobic002G279300 Sobic004G007800 Sobic004G007800 Sobic008G083300--Sobic004G007800 Sobic001G008400 Sobic001G008400 Sobic008G083300--Sobic001G008400 Sobic001G451800 Sobic001G451800 Sobic008G083300--Sobic001G451800 Sobic001G253900 Sobic001G253900 Sobic008G083300--Sobic001G253900 Sobic006G003000 Sobic006G003000 Sobic008G083300--Sobic006G003000 Sobic006G009900--Sobic009G206800 Sobic006G009900--Sobic008G083300 Sobic002G005300 Sobic002G005300 Sobic006G009900--Sobic002G005300 Sobic008G178901 Sobic008G178901 Sobic006G009900--Sobic008G178901 Sobic008G183500 Sobic008G183500 Sobic006G009900--Sobic008G183500 Sobic006G009900--Sobic006G003000 Sobic006G009900--Sobic004G007800 Sobic001G189500 Sobic001G189500 Sobic006G009900--Sobic001G189500 Sobic007G052600 Sobic007G052600 Sobic006G009900--Sobic007G052600 Sobic009G206800--Sobic007G052600 Sobic009G206800--Sobic006G009900 Sobic009G206800--Sobic002G005300 Sobic009G206800--Sobic008G178901 Sobic006G197000 Sobic006G197000 Sobic009G206800--Sobic006G197000 Sobic008G061000 Sobic008G061000 Sobic009G206800--Sobic008G061000 Sobic009G206800--Sobic001G008400 Sobic010G161300 Sobic010G161300 Sobic009G206800--Sobic010G161300 Sobic009G123000 Sobic009G123000 Sobic009G206800--Sobic009G123000 Sobic003G300100--Sobic002G279300 Sobic008G156900 Sobic008G156900 Sobic003G300100--Sobic008G156900 Sobic001G397700 Sobic001G397700 Sobic003G300100--Sobic001G397700 Sobic004G115600 Sobic004G115600 Sobic003G300100--Sobic004G115600 Sobic001G331100 Sobic001G331100 Sobic003G300100--Sobic001G331100 Sobic003G300100--Sobic001G253900 Sobic001G458900 Sobic001G458900 Sobic003G300100--Sobic001G458900 Sobic003G300100--Sobic008G083300 Sobic003G300100--Sobic001G451800 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic002G279300--Sobic001G331100 Sobic003G047200 Sobic003G047200 Sobic002G279300--Sobic003G047200 Sobic002G279300--Sobic003G300100 Sobic002G293800 Sobic002G293800 Sobic002G279300--Sobic002G293800 Sobic001G098900 Sobic001G098900 Sobic002G279300--Sobic001G098900 Sobic001G077200 Sobic001G077200 Sobic002G279300--Sobic001G077200 Sobic010G234800 Sobic010G234800 Sobic002G279300--Sobic010G234800 Sobic003G031400 Sobic003G031400 Sobic004G007800--Sobic003G031400 Sobic004G007800--Sobic008G083300 Sobic004G007800--Sobic006G009900 Sobic004G007800--Sobic008G183500 Sobic007G091900 Sobic007G091900 Sobic004G007800--Sobic007G091900 Sobic008G140800 Sobic008G140800 Sobic004G007800--Sobic008G140800 Sobic004G007800--Sobic001G253900 Sobic004G007800--Sobic001G189500 Sobic002G005200 Sobic002G005200 Sobic004G007800--Sobic002G005200 Sobic001G008400--Sobic008G178901 Sobic001G008400--Sobic009G206800 Sobic001G008400--Sobic002G005300 Sobic010G014200 Sobic010G014200 Sobic001G008400--Sobic010G014200 Sobic006G278400 Sobic006G278400 Sobic001G008400--Sobic006G278400 Sobic007G184700 Sobic007G184700 Sobic001G008400--Sobic007G184700 Sobic001G008400--Sobic007G052600 Sobic001G008400--Sobic010G161300 Sobic001G008400--Sobic002G279300 Sobic001G451800--Sobic001G253900 Sobic003G400600 Sobic003G400600 Sobic001G451800--Sobic003G400600 Sobic007G113900 Sobic007G113900 Sobic001G451800--Sobic007G113900 Sobic003G420100 Sobic003G420100 Sobic001G451800--Sobic003G420100 Sobic001G451800--Sobic008G156900 Sobic003G277200 Sobic003G277200 Sobic001G451800--Sobic003G277200 Sobic010G104400 Sobic010G104400 Sobic001G451800--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic001G451800--Sobic006G214000 Sobic010G181500 Sobic010G181500 Sobic001G451800--Sobic010G181500 Sobic001G253900--Sobic001G451800 Sobic007G162000 Sobic007G162000 Sobic001G253900--Sobic007G162000 Sobic001G253900--Sobic007G113900 Sobic001G253900--Sobic008G156900 Sobic001G253900--Sobic003G300100 Sobic004G288500 Sobic004G288500 Sobic001G253900--Sobic004G288500 Sobic009G134000 Sobic009G134000 Sobic001G253900--Sobic009G134000 Sobic002G202500 Sobic002G202500 Sobic001G253900--Sobic002G202500 Sobic001G253900--Sobic008G083300 Sobic006G003000--Sobic009G123000 Sobic005G198300 Sobic005G198300 Sobic006G003000--Sobic005G198300 Sobic010G194500 Sobic010G194500 Sobic006G003000--Sobic010G194500 Sobic001G005000 Sobic001G005000 Sobic006G003000--Sobic001G005000 Sobic006G018900 Sobic006G018900 Sobic006G003000--Sobic006G018900 Sobic001G148600 Sobic001G148600 Sobic006G003000--Sobic001G148600 Sobic001G239400 Sobic001G239400 Sobic006G003000--Sobic001G239400 Sobic010G014300 Sobic010G014300 Sobic006G003000--Sobic010G014300 Sobic006G003000--Sobic010G161300
Octagon: transcription factors


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