Gene annotation
Transcriptome id Sobic.001G331100.2,Sobic.001G331100.1
Synonym Sb01g032010
Functional annotation expressed protein
UniProt C5WVN3
Pfam PF04788
Panther DB PTHR31300 PTHR31300:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19540 : Protein of unknown function (DUF620)
RAP-DB (Rice) LOC_Os07g40150.1 : expressed protein
MaizeGDB (Corn) Zm00025a004377 , Zm00025a017322 , Zm00025a052214 , Zm00025a048608 , Zm00025a015078
Brachypodium PNT74834 , PNT74835
Barley HORVU4Hr1G013190.12 , HORVU4Hr1G013190.10 , HORVU4Hr1G013190.11 , HORVU4Hr1G013190.4 , HORVU4Hr1G013190.5 , HORVU4Hr1G013190.8 , HORVU4Hr1G013190.9
Wheat TraesCS4D02G076200 , TraesCS4B02G077800 , TraesCS2D02G192800 , TraesCS4A02G237300 , TraesCS2B02G211900 , TraesCS2A02G194900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
2 Sobic.006G108000 formin, putative, expressed -
3 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
5 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
6 Sobic.008G163800 expressed protein -
7 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
8 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
9 Sobic.001G263500 glycosyl hydrolases family 17, putative, expressed -
10 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
11 Sobic.008G020500 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
12 Sobic.004G198200 expressed protein -
13 Sobic.003G047200 expressed protein -
14 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
15 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
16 Sobic.009G190400 expressed protein -
17 Sobic.010G161300 receptor-like kinase, putative, expressed -
18 Sobic.002G330800 BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
19 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
20 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G331100 Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic001G331100--Sobic004G115600 Sobic006G108000 Sobic006G108000 Sobic001G331100--Sobic006G108000 Sobic002G279300 Sobic002G279300 Sobic001G331100--Sobic002G279300 Sobic009G254400 Sobic009G254400 Sobic001G331100--Sobic009G254400 Sobic006G155900 Sobic006G155900 Sobic001G331100--Sobic006G155900 Sobic008G163800 Sobic008G163800 Sobic001G331100--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic001G331100--Sobic003G406500 Sobic003G040100 Sobic003G040100 Sobic001G331100--Sobic003G040100 Sobic001G263500 Sobic001G263500 Sobic001G331100--Sobic001G263500 Sobic004G115600--Sobic002G279300 Sobic004G115600--Sobic001G331100 Sobic006G278400 Sobic006G278400 Sobic004G115600--Sobic006G278400 Sobic004G115600--Sobic006G108000 Sobic004G227000 Sobic004G227000 Sobic004G115600--Sobic004G227000 Sobic001G458900 Sobic001G458900 Sobic004G115600--Sobic001G458900 Sobic003G301200 Sobic003G301200 Sobic004G115600--Sobic003G301200 Sobic003G300100 Sobic003G300100 Sobic004G115600--Sobic003G300100 Sobic003G047200 Sobic003G047200 Sobic004G115600--Sobic003G047200 Sobic006G108000--Sobic003G406500 Sobic006G108000--Sobic001G331100 Sobic006G108000--Sobic004G115600 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic006G108000--Sobic009G254400 Sobic006G108000--Sobic003G040100 Sobic007G153300 Sobic007G153300 Sobic006G108000--Sobic007G153300 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic002G279300--Sobic001G331100 Sobic002G279300--Sobic003G047200 Sobic002G279300--Sobic003G300100 Sobic002G293800 Sobic002G293800 Sobic002G279300--Sobic002G293800 Sobic001G098900 Sobic001G098900 Sobic002G279300--Sobic001G098900 Sobic001G077200 Sobic001G077200 Sobic002G279300--Sobic001G077200 Sobic010G234800 Sobic010G234800 Sobic002G279300--Sobic010G234800 Sobic009G254400--Sobic001G263500 Sobic009G254400--Sobic003G406500 Sobic009G254400--Sobic008G163800 Sobic002G330800 Sobic002G330800 Sobic009G254400--Sobic002G330800 Sobic009G254400--Sobic001G331100 Sobic010G179000 Sobic010G179000 Sobic009G254400--Sobic010G179000 Sobic009G254400--Sobic006G108000 Sobic009G254400--Sobic006G278400 Sobic006G079100 Sobic006G079100 Sobic009G254400--Sobic006G079100 Sobic009G190400 Sobic009G190400 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic001G494300 Sobic001G494300 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic003G414400 Sobic003G414400 Sobic006G155900--Sobic003G414400 Sobic001G070200 Sobic001G070200 Sobic006G155900--Sobic001G070200 Sobic006G155900--Sobic001G331100 Sobic008G031600 Sobic008G031600 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic010G014900 Sobic010G014900 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic007G158400 Sobic007G158400 Sobic008G163800--Sobic007G158400 Sobic004G061600 Sobic004G061600 Sobic008G163800--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic008G163800--Sobic003G390300 Sobic004G107400 Sobic004G107400 Sobic008G163800--Sobic004G107400 Sobic010G029200 Sobic010G029200 Sobic008G163800--Sobic010G029200 Sobic003G406500--Sobic009G254400 Sobic003G406500--Sobic007G153300 Sobic003G406500--Sobic006G108000 Sobic003G406500--Sobic008G163800 Sobic003G006500 Sobic003G006500 Sobic003G406500--Sobic003G006500 Sobic003G406500--Sobic001G263500 Sobic003G359200 Sobic003G359200 Sobic003G406500--Sobic003G359200 Sobic003G406500--Sobic001G331100 Sobic010G209800 Sobic010G209800 Sobic003G406500--Sobic010G209800 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic004G156600 Sobic004G156600 Sobic003G040100--Sobic004G156600 Sobic003G040100--Sobic001G494300 Sobic003G040100--Sobic003G390300 Sobic003G415500 Sobic003G415500 Sobic003G040100--Sobic003G415500 Sobic003G040100--Sobic004G061600 Sobic001G263500--Sobic009G254400 Sobic001G263500--Sobic008G163800 Sobic001G263500--Sobic010G179000 Sobic001G263500--Sobic006G079100 Sobic010G161300 Sobic010G161300 Sobic001G263500--Sobic010G161300 Sobic001G263500--Sobic003G406500 Sobic001G263500--Sobic008G031600 Sobic001G263500--Sobic006G278400 Sobic001G263500--Sobic001G331100
Octagon: transcription factors


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