Gene annotation
Transcriptome id Sobic.006G278400.1
Synonym Sb06g033920
Functional annotation ZOS4-14 - C2H2 zinc finger protein, expressed
UniProt C5YB32
Pfam -
Panther DB PTHR31681 PTHR31681:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75710 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os04g59380.1 : ZOS4-14 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a057484 , Zm00025a001716
Brachypodium KQJ81628 , KQJ85472
Barley HORVU3Hr1G077490.2 , HORVU3Hr1G077490.3 , HORVU2Hr1G125620.2 , HORVU2Hr1G125620.1
Wheat TraesCS3B02G353600 , TraesCS2A02G569700 , TraesCS2B02G627700 , TraesCS2D02G580400 , TraesCSU02G012300 , TraesCS3D02G317900 , TraesCS3A02G324600 , TraesCS3A02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G227000 expressed protein -
2 Sobic.001G180300 expressed protein -
3 Sobic.003G301200 expressed protein -
4 Sobic.008G163600 expressed protein -
5 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
6 Sobic.006G187600 DUF623 domain containing protein, expressed -
7 Sobic.010G014200 expressed protein -
8 Sobic.002G425900 expressed protein -
9 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
10 Sobic.010G224800 patellin-5, putative, expressed -
11 Sobic.010G178900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
12 Sobic.010G114400 expressed protein -
13 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
14 Sobic.003G092200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
15 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
16 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.005G226900 expressed protein -
18 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
19 Sobic.K044200 - -
20 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G278400 Sobic006G278400 Sobic004G227000 Sobic004G227000 Sobic006G278400--Sobic004G227000 Sobic001G180300 Sobic001G180300 Sobic006G278400--Sobic001G180300 Sobic003G301200 Sobic003G301200 Sobic006G278400--Sobic003G301200 Sobic008G163600 Sobic008G163600 Sobic006G278400--Sobic008G163600 Sobic007G081300 Sobic007G081300 Sobic006G278400--Sobic007G081300 Sobic006G187600 Sobic006G187600 Sobic006G278400--Sobic006G187600 Sobic010G014200 Sobic010G014200 Sobic006G278400--Sobic010G014200 Sobic002G425900 Sobic002G425900 Sobic006G278400--Sobic002G425900 Sobic004G128600 Sobic004G128600 Sobic006G278400--Sobic004G128600 Sobic004G227000--Sobic006G278400 Sobic004G227000--Sobic001G180300 Sobic004G227000--Sobic002G425900 Sobic004G227000--Sobic006G187600 Sobic004G227000--Sobic004G128600 Sobic010G224800 Sobic010G224800 Sobic004G227000--Sobic010G224800 Sobic002G059200 Sobic002G059200 Sobic004G227000--Sobic002G059200 Sobic004G329100 Sobic004G329100 Sobic004G227000--Sobic004G329100 Sobic010G114400 Sobic010G114400 Sobic004G227000--Sobic010G114400 Sobic001G180300--Sobic006G187600 Sobic001G180300--Sobic004G227000 Sobic001G180300--Sobic006G278400 Sobic001G180300--Sobic010G014200 Sobic003G092200 Sobic003G092200 Sobic001G180300--Sobic003G092200 Sobic001G180300--Sobic002G425900 Sobic001G180300--Sobic008G163600 Sobic001G180300--Sobic004G329100 Sobic010G178900 Sobic010G178900 Sobic001G180300--Sobic010G178900 Sobic003G301200--Sobic007G081300 Sobic003G301200--Sobic006G278400 Sobic003G235800 Sobic003G235800 Sobic003G301200--Sobic003G235800 Sobic003G301200--Sobic001G180300 Sobic003G301200--Sobic004G227000 Sobic010G189800 Sobic010G189800 Sobic003G301200--Sobic010G189800 Sobic003G301200--Sobic008G163600 Sobic006G005000 Sobic006G005000 Sobic003G301200--Sobic006G005000 Sobic003G301200--Sobic006G187600 Sobic008G163600--Sobic002G425900 Sobic008G163600--Sobic010G224800 Sobic008G163600--Sobic006G278400 Sobic008G163600--Sobic010G114400 Sobic002G284800 Sobic002G284800 Sobic008G163600--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic008G163600--Sobic001G255700 Sobic010G179150 Sobic010G179150 Sobic008G163600--Sobic010G179150 Sobic007G001300 Sobic007G001300 Sobic008G163600--Sobic007G001300 Sobic004G197300 Sobic004G197300 Sobic008G163600--Sobic004G197300 Sobic007G081300--Sobic003G301200 Sobic007G081300--Sobic006G278400 Sobic007G081300--Sobic010G189800 Sobic007G081300--Sobic001G180300 Sobic007G081300--Sobic003G092200 Sobic007G081300--Sobic004G227000 Sobic007G149600 Sobic007G149600 Sobic007G081300--Sobic007G149600 Sobic007G081300--Sobic006G187600 Sobic007G081300--Sobic006G005000 Sobic006G187600--Sobic001G180300 Sobic006G187600--Sobic004G227000 Sobic006G187600--Sobic002G425900 Sobic006G187600--Sobic003G092200 Sobic006G187600--Sobic010G178900 Sobic006G187600--Sobic010G224800 Sobic006G187600--Sobic004G197300 Sobic006G187600--Sobic010G114400 Sobic001G441800 Sobic001G441800 Sobic006G187600--Sobic001G441800 Sobic010G014200--Sobic001G180300 Sobic010G014200--Sobic004G329100 Sobic010G014200--Sobic004G128600 Sobic010G014200--Sobic010G178900 Sobic010G014200--Sobic006G278400 Sobic010G014200--Sobic008G163600 Sobic005G226900 Sobic005G226900 Sobic010G014200--Sobic005G226900 Sobic010G014200--Sobic004G227000 Sobic001G541900 Sobic001G541900 Sobic010G014200--Sobic001G541900 Sobic002G425900--Sobic010G224800 Sobic002G425900--Sobic002G284800 Sobic002G425900--Sobic001G255700 Sobic003G105300 Sobic003G105300 Sobic002G425900--Sobic003G105300 Sobic002G425900--Sobic010G114400 Sobic003G368150 Sobic003G368150 Sobic002G425900--Sobic003G368150 Sobic008G133100 Sobic008G133100 Sobic002G425900--Sobic008G133100 Sobic003G109400 Sobic003G109400 Sobic002G425900--Sobic003G109400 Sobic002G425900--Sobic007G001300 Sobic006G197000 Sobic006G197000 Sobic004G128600--Sobic006G197000 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic004G128600--Sobic010G114400 Sobic009G154000 Sobic009G154000 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic003G201400 Sobic003G201400 Sobic004G128600--Sobic003G201400 Sobic001G200500 Sobic001G200500 Sobic004G128600--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G128600--Sobic005G102100
Octagon: transcription factors


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