Gene annotation
Transcriptome id Sobic.010G014200.1
Synonym Sb10g001420
Functional annotation expressed protein
UniProt C5Z2V6
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19090 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os06g02960.1 : expressed protein
MaizeGDB (Corn) Zm00025a041329 , Zm00025a050236
Brachypodium KQK07140 , KQK19630 , KQK19834 , KQK19833 , KQJ85813 , KQJ85817
Barley HORVU7Hr1G009350.8 , HORVU7Hr1G009350.9 , HORVU7Hr1G009350.6 , HORVU7Hr1G009350.7 , HORVU7Hr1G009350.4 , HORVU7Hr1G009350.5 , HORVU7Hr1G009350.2 , HORVU7Hr1G009350.3 , HORVU7Hr1G009350.1 , HORVU7Hr1G009350.10 , HORVU7Hr1G009350.11 , HORVU7Hr1G009350.12 , HORVU7Hr1G009660.2 , HORVU7Hr1G009660.1 , HORVU7Hr1G036050.1
Wheat TraesCS7A02G052100 , TraesCS1A02G039900 , TraesCS7D02G047700 , TraesCS4A02G439200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G180300 expressed protein -
2 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
3 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
4 Sobic.010G178900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
6 Sobic.008G163600 expressed protein -
7 Sobic.005G226900 expressed protein -
8 Sobic.004G227000 expressed protein -
9 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
10 Sobic.006G166601 - -
11 Sobic.002G425900 expressed protein -
12 Sobic.003G136700 - -
13 Sobic.010G224800 patellin-5, putative, expressed -
14 Sobic.004G197300 - -
15 Sobic.003G239700 proteins of unknown function domain containing protein, expressed -
16 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
17 Sobic.010G114400 expressed protein -
18 Sobic.001G145300 - -
19 Sobic.009G152901 - -
20 Sobic.003G368150 - -


Gene co-expression network
sample Sobic010G014200 Sobic010G014200 Sobic001G180300 Sobic001G180300 Sobic010G014200--Sobic001G180300 Sobic004G329100 Sobic004G329100 Sobic010G014200--Sobic004G329100 Sobic004G128600 Sobic004G128600 Sobic010G014200--Sobic004G128600 Sobic010G178900 Sobic010G178900 Sobic010G014200--Sobic010G178900 Sobic006G278400 Sobic006G278400 Sobic010G014200--Sobic006G278400 Sobic008G163600 Sobic008G163600 Sobic010G014200--Sobic008G163600 Sobic005G226900 Sobic005G226900 Sobic010G014200--Sobic005G226900 Sobic004G227000 Sobic004G227000 Sobic010G014200--Sobic004G227000 Sobic001G541900 Sobic001G541900 Sobic010G014200--Sobic001G541900 Sobic006G187600 Sobic006G187600 Sobic001G180300--Sobic006G187600 Sobic001G180300--Sobic004G227000 Sobic001G180300--Sobic006G278400 Sobic001G180300--Sobic010G014200 Sobic003G092200 Sobic003G092200 Sobic001G180300--Sobic003G092200 Sobic002G425900 Sobic002G425900 Sobic001G180300--Sobic002G425900 Sobic001G180300--Sobic008G163600 Sobic001G180300--Sobic004G329100 Sobic001G180300--Sobic010G178900 Sobic004G329100--Sobic001G541900 Sobic004G197300 Sobic004G197300 Sobic004G329100--Sobic004G197300 Sobic007G001300 Sobic007G001300 Sobic004G329100--Sobic007G001300 Sobic010G224800 Sobic010G224800 Sobic004G329100--Sobic010G224800 Sobic003G368150 Sobic003G368150 Sobic004G329100--Sobic003G368150 Sobic001G255700 Sobic001G255700 Sobic004G329100--Sobic001G255700 Sobic010G114400 Sobic010G114400 Sobic004G329100--Sobic010G114400 Sobic009G163500 Sobic009G163500 Sobic004G329100--Sobic009G163500 Sobic010G179150 Sobic010G179150 Sobic004G329100--Sobic010G179150 Sobic006G197000 Sobic006G197000 Sobic004G128600--Sobic006G197000 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic004G128600--Sobic010G114400 Sobic009G154000 Sobic009G154000 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic003G201400 Sobic003G201400 Sobic004G128600--Sobic003G201400 Sobic001G200500 Sobic001G200500 Sobic004G128600--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G128600--Sobic005G102100 Sobic010G178900--Sobic009G163500 Sobic004G251350 Sobic004G251350 Sobic010G178900--Sobic004G251350 Sobic003G136700 Sobic003G136700 Sobic010G178900--Sobic003G136700 Sobic010G178900--Sobic010G179150 Sobic010G178900--Sobic004G197300 Sobic008G020300 Sobic008G020300 Sobic010G178900--Sobic008G020300 Sobic004G016600 Sobic004G016600 Sobic010G178900--Sobic004G016600 Sobic007G013100 Sobic007G013100 Sobic010G178900--Sobic007G013100 Sobic010G178900--Sobic003G368150 Sobic006G278400--Sobic004G227000 Sobic006G278400--Sobic001G180300 Sobic003G301200 Sobic003G301200 Sobic006G278400--Sobic003G301200 Sobic006G278400--Sobic008G163600 Sobic007G081300 Sobic007G081300 Sobic006G278400--Sobic007G081300 Sobic006G278400--Sobic006G187600 Sobic006G278400--Sobic010G014200 Sobic006G278400--Sobic002G425900 Sobic006G278400--Sobic004G128600 Sobic008G163600--Sobic002G425900 Sobic008G163600--Sobic010G224800 Sobic008G163600--Sobic006G278400 Sobic008G163600--Sobic010G114400 Sobic002G284800 Sobic002G284800 Sobic008G163600--Sobic002G284800 Sobic008G163600--Sobic001G255700 Sobic008G163600--Sobic010G179150 Sobic008G163600--Sobic007G001300 Sobic008G163600--Sobic004G197300 Sobic005G226900--Sobic008G163600 Sobic005G226900--Sobic010G178900 Sobic005G226900--Sobic010G014200 Sobic001G481201 Sobic001G481201 Sobic005G226900--Sobic001G481201 Sobic005G226900--Sobic010G114400 Sobic005G226900--Sobic004G128600 Sobic008G031600 Sobic008G031600 Sobic005G226900--Sobic008G031600 Sobic009G127600 Sobic009G127600 Sobic005G226900--Sobic009G127600 Sobic005G226900--Sobic010G224800 Sobic004G227000--Sobic006G278400 Sobic004G227000--Sobic001G180300 Sobic004G227000--Sobic002G425900 Sobic004G227000--Sobic006G187600 Sobic004G227000--Sobic004G128600 Sobic004G227000--Sobic010G224800 Sobic002G059200 Sobic002G059200 Sobic004G227000--Sobic002G059200 Sobic004G227000--Sobic004G329100 Sobic004G227000--Sobic010G114400 Sobic001G407000 Sobic001G407000 Sobic001G541900--Sobic001G407000 Sobic001G541900--Sobic008G020300 Sobic001G537900 Sobic001G537900 Sobic001G541900--Sobic001G537900 Sobic001G541900--Sobic009G163500 Sobic004G354800 Sobic004G354800 Sobic001G541900--Sobic004G354800 Sobic003G105300 Sobic003G105300 Sobic001G541900--Sobic003G105300 Sobic001G541900--Sobic004G197300 Sobic001G541900--Sobic001G255700 Sobic009G082400 Sobic009G082400 Sobic001G541900--Sobic009G082400
Octagon: transcription factors


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