Gene annotation
Transcriptome id Sobic.004G227000.1
Synonym Sb04g027140
Functional annotation expressed protein
UniProt C5XY90
Pfam -
Panther DB PTHR34367 PTHR34367:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65710 : -
RAP-DB (Rice) LOC_Os04g44640.1 : ulp1 protease family, C-terminal catalytic domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032101 , Zm00025a056559 , Zm00025a010476
Brachypodium KQK00488 , KQJ83712
Barley -
Wheat TraesCS6A02G234800 , TraesCS6D02G217400 , TraesCS6B02G263500 , TraesCS2B02G391100 , TraesCS2D02G370200 , TraesCS2A02G373900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
2 Sobic.001G180300 expressed protein -
3 Sobic.002G425900 expressed protein -
4 Sobic.006G187600 DUF623 domain containing protein, expressed -
5 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
6 Sobic.010G224800 patellin-5, putative, expressed -
7 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
8 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
9 Sobic.010G114400 expressed protein -
10 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
12 Sobic.003G092200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.008G163600 expressed protein -
14 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
15 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
17 Sobic.002G284800 expressed protein -
18 Sobic.003G368150 - -
19 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
20 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase


Gene co-expression network
sample Sobic004G227000 Sobic004G227000 Sobic006G278400 Sobic006G278400 Sobic004G227000--Sobic006G278400 Sobic001G180300 Sobic001G180300 Sobic004G227000--Sobic001G180300 Sobic002G425900 Sobic002G425900 Sobic004G227000--Sobic002G425900 Sobic006G187600 Sobic006G187600 Sobic004G227000--Sobic006G187600 Sobic004G128600 Sobic004G128600 Sobic004G227000--Sobic004G128600 Sobic010G224800 Sobic010G224800 Sobic004G227000--Sobic010G224800 Sobic002G059200 Sobic002G059200 Sobic004G227000--Sobic002G059200 Sobic004G329100 Sobic004G329100 Sobic004G227000--Sobic004G329100 Sobic010G114400 Sobic010G114400 Sobic004G227000--Sobic010G114400 Sobic006G278400--Sobic004G227000 Sobic006G278400--Sobic001G180300 Sobic003G301200 Sobic003G301200 Sobic006G278400--Sobic003G301200 Sobic008G163600 Sobic008G163600 Sobic006G278400--Sobic008G163600 Sobic007G081300 Sobic007G081300 Sobic006G278400--Sobic007G081300 Sobic006G278400--Sobic006G187600 Sobic010G014200 Sobic010G014200 Sobic006G278400--Sobic010G014200 Sobic006G278400--Sobic002G425900 Sobic006G278400--Sobic004G128600 Sobic001G180300--Sobic006G187600 Sobic001G180300--Sobic004G227000 Sobic001G180300--Sobic006G278400 Sobic001G180300--Sobic010G014200 Sobic003G092200 Sobic003G092200 Sobic001G180300--Sobic003G092200 Sobic001G180300--Sobic002G425900 Sobic001G180300--Sobic008G163600 Sobic001G180300--Sobic004G329100 Sobic010G178900 Sobic010G178900 Sobic001G180300--Sobic010G178900 Sobic002G425900--Sobic010G224800 Sobic002G284800 Sobic002G284800 Sobic002G425900--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic002G425900--Sobic001G255700 Sobic003G105300 Sobic003G105300 Sobic002G425900--Sobic003G105300 Sobic002G425900--Sobic010G114400 Sobic003G368150 Sobic003G368150 Sobic002G425900--Sobic003G368150 Sobic008G133100 Sobic008G133100 Sobic002G425900--Sobic008G133100 Sobic003G109400 Sobic003G109400 Sobic002G425900--Sobic003G109400 Sobic007G001300 Sobic007G001300 Sobic002G425900--Sobic007G001300 Sobic006G187600--Sobic001G180300 Sobic006G187600--Sobic004G227000 Sobic006G187600--Sobic002G425900 Sobic006G187600--Sobic003G092200 Sobic006G187600--Sobic010G178900 Sobic006G187600--Sobic010G224800 Sobic004G197300 Sobic004G197300 Sobic006G187600--Sobic004G197300 Sobic006G187600--Sobic010G114400 Sobic001G441800 Sobic001G441800 Sobic006G187600--Sobic001G441800 Sobic006G197000 Sobic006G197000 Sobic004G128600--Sobic006G197000 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic004G128600--Sobic010G114400 Sobic009G154000 Sobic009G154000 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic003G201400 Sobic003G201400 Sobic004G128600--Sobic003G201400 Sobic001G200500 Sobic001G200500 Sobic004G128600--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G128600--Sobic005G102100 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic002G156300 Sobic002G156300 Sobic010G224800--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic010G224800--Sobic009G031100 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic009G163500 Sobic009G163500 Sobic010G224800--Sobic009G163500 Sobic002G403400 Sobic002G403400 Sobic002G059200--Sobic002G403400 Sobic003G350100 Sobic003G350100 Sobic002G059200--Sobic003G350100 Sobic004G265400 Sobic004G265400 Sobic002G059200--Sobic004G265400 Sobic007G149600 Sobic007G149600 Sobic002G059200--Sobic007G149600 Sobic001G193400 Sobic001G193400 Sobic002G059200--Sobic001G193400 Sobic003G067300 Sobic003G067300 Sobic002G059200--Sobic003G067300 Sobic002G056300 Sobic002G056300 Sobic002G059200--Sobic002G056300 Sobic007G221800 Sobic007G221800 Sobic002G059200--Sobic007G221800 Sobic003G067500 Sobic003G067500 Sobic002G059200--Sobic003G067500 Sobic001G541900 Sobic001G541900 Sobic004G329100--Sobic001G541900 Sobic004G329100--Sobic004G197300 Sobic004G329100--Sobic007G001300 Sobic004G329100--Sobic010G224800 Sobic004G329100--Sobic003G368150 Sobic004G329100--Sobic001G255700 Sobic004G329100--Sobic010G114400 Sobic004G329100--Sobic009G163500 Sobic010G179150 Sobic010G179150 Sobic004G329100--Sobic010G179150 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.