Gene annotation
Transcriptome id Sobic.001G441800.1
Synonym Sb01g041520
Functional annotation hydroxyproline-rich glycoprotein family protein, putative, expressed
UniProt A0A1B6QPG6
Pfam -
Panther DB PTHR31447 PTHR31447:SF0
NCBI CDD KOG4176; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14710 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os03g13560.1 : hydroxyproline-rich glycoprotein family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001501
Brachypodium KQK22651 , KQK22652
Barley HORVU4Hr1G064230.6 , HORVU4Hr1G064230.5
Wheat TraesCS4A02G073400 , TraesCS4D02G230700 , TraesCS4D02G230700 , TraesCS4D02G230700 , TraesCS4B02G229600 , TraesCS4B02G229600 , TraesCS4B02G229600
Populus -


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cDNA sequences
Sobic.001G441800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G368150 - -
2 Sobic.002G387100 X8 domain containing protein, expressed -
3 Sobic.007G122300 - -
4 Sobic.002G284800 expressed protein -
5 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
6 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.004G239000 - -
8 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.001G255700 - -
10 Sobic.003G367401 - -
11 Sobic.008G131800 zinc knuckle family protein, expressed -
12 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.010G201000 - -
14 Sobic.001G525000 polygalacturonase, putative, expressed -
15 Sobic.009G152901 - -
16 Sobic.004G197300 - -
17 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
18 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
19 Sobic.003G105300 - -
20 Sobic.007G111600 WRKY89, expressed -


Gene co-expression network
sample Sobic001G441800 Sobic001G441800 Sobic003G368150 Sobic003G368150 Sobic001G441800--Sobic003G368150 Sobic002G387100 Sobic002G387100 Sobic001G441800--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic001G441800--Sobic007G122300 Sobic002G284800 Sobic002G284800 Sobic001G441800--Sobic002G284800 Sobic002G430200 Sobic002G430200 Sobic001G441800--Sobic002G430200 Sobic008G133100 Sobic008G133100 Sobic001G441800--Sobic008G133100 Sobic004G239000 Sobic004G239000 Sobic001G441800--Sobic004G239000 Sobic003G099500 Sobic003G099500 Sobic001G441800--Sobic003G099500 Sobic001G255700 Sobic001G255700 Sobic001G441800--Sobic001G255700 Sobic003G368150--Sobic002G284800 Sobic003G368150--Sobic001G255700 Sobic008G131800 Sobic008G131800 Sobic003G368150--Sobic008G131800 Sobic003G368150--Sobic007G122300 Sobic003G368150--Sobic004G239000 Sobic003G368150--Sobic008G133100 Sobic003G368150--Sobic002G387100 Sobic004G197300 Sobic004G197300 Sobic003G368150--Sobic004G197300 Sobic003G368150--Sobic003G099500 Sobic002G387100--Sobic002G430200 Sobic002G387100--Sobic007G122300 Sobic002G387100--Sobic003G099500 Sobic002G387100--Sobic004G239000 Sobic001G525000 Sobic001G525000 Sobic002G387100--Sobic001G525000 Sobic003G367401 Sobic003G367401 Sobic002G387100--Sobic003G367401 Sobic002G387100--Sobic002G284800 Sobic002G387100--Sobic003G368150 Sobic003G120400 Sobic003G120400 Sobic002G387100--Sobic003G120400 Sobic007G122300--Sobic002G430200 Sobic007G122300--Sobic002G387100 Sobic007G122300--Sobic003G368150 Sobic007G122300--Sobic004G239000 Sobic007G122300--Sobic003G099500 Sobic007G122300--Sobic003G367401 Sobic007G122300--Sobic008G131800 Sobic007G122300--Sobic002G284800 Sobic007G122300--Sobic001G441800 Sobic002G284800--Sobic003G368150 Sobic002G284800--Sobic001G255700 Sobic002G284800--Sobic004G239000 Sobic002G284800--Sobic008G131800 Sobic002G284800--Sobic008G133100 Sobic002G284800--Sobic003G099500 Sobic002G284800--Sobic002G387100 Sobic002G284800--Sobic007G122300 Sobic003G105300 Sobic003G105300 Sobic002G284800--Sobic003G105300 Sobic002G430200--Sobic002G387100 Sobic002G430200--Sobic007G122300 Sobic002G430200--Sobic003G099500 Sobic002G430200--Sobic003G367401 Sobic002G430200--Sobic001G525000 Sobic002G430200--Sobic004G239000 Sobic002G430200--Sobic003G120400 Sobic010G201000 Sobic010G201000 Sobic002G430200--Sobic010G201000 Sobic002G430200--Sobic002G284800 Sobic008G133100--Sobic002G284800 Sobic008G133100--Sobic001G255700 Sobic008G133100--Sobic003G368150 Sobic008G133100--Sobic001G441800 Sobic008G133100--Sobic004G239000 Sobic008G133100--Sobic008G131800 Sobic008G133100--Sobic003G105300 Sobic008G133100--Sobic004G197300 Sobic001G200500 Sobic001G200500 Sobic008G133100--Sobic001G200500 Sobic004G239000--Sobic003G099500 Sobic004G239000--Sobic008G131800 Sobic004G239000--Sobic002G284800 Sobic004G239000--Sobic002G430200 Sobic001G016900 Sobic001G016900 Sobic004G239000--Sobic001G016900 Sobic004G239000--Sobic003G368150 Sobic004G239000--Sobic001G255700 Sobic004G239000--Sobic002G387100 Sobic004G239000--Sobic007G122300 Sobic003G099500--Sobic004G239000 Sobic003G099500--Sobic002G387100 Sobic003G099500--Sobic002G430200 Sobic003G099500--Sobic001G016900 Sobic003G099500--Sobic007G122300 Sobic003G099500--Sobic002G284800 Sobic003G099500--Sobic008G131800 Sobic003G099500--Sobic003G368150 Sobic007G111600 Sobic007G111600 Sobic003G099500--Sobic007G111600 Sobic001G255700--Sobic002G284800 Sobic001G255700--Sobic003G368150 Sobic001G255700--Sobic008G131800 Sobic001G255700--Sobic004G239000 Sobic001G255700--Sobic008G133100 Sobic001G255700--Sobic003G105300 Sobic001G255700--Sobic004G197300 Sobic010G179150 Sobic010G179150 Sobic001G255700--Sobic010G179150 Sobic009G163500 Sobic009G163500 Sobic001G255700--Sobic009G163500
Octagon: transcription factors


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