Gene annotation
Transcriptome id Sobic.006G187600.1
Synonym Sb06g026140
Functional annotation DUF623 domain containing protein, expressed
UniProt C5YEG2
Pfam PF04844
Panther DB PTHR33057 PTHR33057:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52525 : ovate family protein 6
RAP-DB (Rice) LOC_Os04g48830.1 : DUF623 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056740 , Zm00025a010118 , Zm00025a021512
Brachypodium KQJ84164
Barley HORVU2Hr1G094240.1
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G187600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G180300 expressed protein -
2 Sobic.004G227000 expressed protein -
3 Sobic.002G425900 expressed protein -
4 Sobic.003G092200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
5 Sobic.010G178900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
6 Sobic.010G224800 patellin-5, putative, expressed -
7 Sobic.004G197300 - -
8 Sobic.010G114400 expressed protein -
9 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
10 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G105300 - -
12 Sobic.009G152901 - -
13 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
14 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
15 Sobic.010G179150 - -
16 Sobic.009G163500 - -
17 Sobic.003G368150 - -
18 Sobic.001G255700 - -
19 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.003G109400 - -


Gene co-expression network
sample Sobic006G187600 Sobic006G187600 Sobic001G180300 Sobic001G180300 Sobic006G187600--Sobic001G180300 Sobic004G227000 Sobic004G227000 Sobic006G187600--Sobic004G227000 Sobic002G425900 Sobic002G425900 Sobic006G187600--Sobic002G425900 Sobic003G092200 Sobic003G092200 Sobic006G187600--Sobic003G092200 Sobic010G178900 Sobic010G178900 Sobic006G187600--Sobic010G178900 Sobic010G224800 Sobic010G224800 Sobic006G187600--Sobic010G224800 Sobic004G197300 Sobic004G197300 Sobic006G187600--Sobic004G197300 Sobic010G114400 Sobic010G114400 Sobic006G187600--Sobic010G114400 Sobic001G441800 Sobic001G441800 Sobic006G187600--Sobic001G441800 Sobic001G180300--Sobic006G187600 Sobic001G180300--Sobic004G227000 Sobic006G278400 Sobic006G278400 Sobic001G180300--Sobic006G278400 Sobic010G014200 Sobic010G014200 Sobic001G180300--Sobic010G014200 Sobic001G180300--Sobic003G092200 Sobic001G180300--Sobic002G425900 Sobic008G163600 Sobic008G163600 Sobic001G180300--Sobic008G163600 Sobic004G329100 Sobic004G329100 Sobic001G180300--Sobic004G329100 Sobic001G180300--Sobic010G178900 Sobic004G227000--Sobic006G278400 Sobic004G227000--Sobic001G180300 Sobic004G227000--Sobic002G425900 Sobic004G227000--Sobic006G187600 Sobic004G128600 Sobic004G128600 Sobic004G227000--Sobic004G128600 Sobic004G227000--Sobic010G224800 Sobic002G059200 Sobic002G059200 Sobic004G227000--Sobic002G059200 Sobic004G227000--Sobic004G329100 Sobic004G227000--Sobic010G114400 Sobic002G425900--Sobic010G224800 Sobic002G284800 Sobic002G284800 Sobic002G425900--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic002G425900--Sobic001G255700 Sobic003G105300 Sobic003G105300 Sobic002G425900--Sobic003G105300 Sobic002G425900--Sobic010G114400 Sobic003G368150 Sobic003G368150 Sobic002G425900--Sobic003G368150 Sobic008G133100 Sobic008G133100 Sobic002G425900--Sobic008G133100 Sobic003G109400 Sobic003G109400 Sobic002G425900--Sobic003G109400 Sobic007G001300 Sobic007G001300 Sobic002G425900--Sobic007G001300 Sobic003G367401 Sobic003G367401 Sobic003G092200--Sobic003G367401 Sobic010G201000 Sobic010G201000 Sobic003G092200--Sobic010G201000 Sobic009G152901 Sobic009G152901 Sobic003G092200--Sobic009G152901 Sobic003G065001 Sobic003G065001 Sobic003G092200--Sobic003G065001 Sobic001G016900 Sobic001G016900 Sobic003G092200--Sobic001G016900 Sobic003G092200--Sobic001G441800 Sobic002G430200 Sobic002G430200 Sobic003G092200--Sobic002G430200 Sobic004G239000 Sobic004G239000 Sobic003G092200--Sobic004G239000 Sobic002G387100 Sobic002G387100 Sobic003G092200--Sobic002G387100 Sobic009G163500 Sobic009G163500 Sobic010G178900--Sobic009G163500 Sobic004G251350 Sobic004G251350 Sobic010G178900--Sobic004G251350 Sobic003G136700 Sobic003G136700 Sobic010G178900--Sobic003G136700 Sobic010G179150 Sobic010G179150 Sobic010G178900--Sobic010G179150 Sobic010G178900--Sobic004G197300 Sobic008G020300 Sobic008G020300 Sobic010G178900--Sobic008G020300 Sobic004G016600 Sobic004G016600 Sobic010G178900--Sobic004G016600 Sobic007G013100 Sobic007G013100 Sobic010G178900--Sobic007G013100 Sobic010G178900--Sobic003G368150 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic002G156300 Sobic002G156300 Sobic010G224800--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic010G224800--Sobic009G031100 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic010G224800--Sobic009G163500 Sobic004G197300--Sobic010G179150 Sobic004G197300--Sobic003G368150 Sobic004G197300--Sobic001G255700 Sobic004G197300--Sobic007G001300 Sobic004G197300--Sobic002G284800 Sobic008G131800 Sobic008G131800 Sobic004G197300--Sobic008G131800 Sobic004G197300--Sobic009G163500 Sobic001G537900 Sobic001G537900 Sobic004G197300--Sobic001G537900 Sobic004G197300--Sobic003G109400 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic001G441800--Sobic003G368150 Sobic001G441800--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic001G441800--Sobic007G122300 Sobic001G441800--Sobic002G284800 Sobic001G441800--Sobic002G430200 Sobic001G441800--Sobic008G133100 Sobic001G441800--Sobic004G239000 Sobic003G099500 Sobic003G099500 Sobic001G441800--Sobic003G099500 Sobic001G441800--Sobic001G255700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.