Gene annotation
Transcriptome id Sobic.007G081300.2,Sobic.007G081300.1
Synonym Sb07g006540
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1Z5R8U2 , A0A1B6PGD5
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF114
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G59740 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g36040.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a011277 , Zm00025a015551 , Zm00025a029894
Brachypodium KQJ88864 , KQJ88863 , KQJ82778
Barley HORVU2Hr1G076880.24 , HORVU2Hr1G076880.25 , HORVU2Hr1G076880.20 , HORVU2Hr1G076880.21 , HORVU2Hr1G076880.22 , HORVU2Hr1G076880.23 , HORVU2Hr1G076880.9 , HORVU2Hr1G076880.8 , HORVU2Hr1G076880.4 , HORVU2Hr1G076880.3 , HORVU2Hr1G076880.19 , HORVU2Hr1G076880.18 , HORVU2Hr1G076880.11 , HORVU2Hr1G076880.10 , HORVU2Hr1G076880.13 , HORVU2Hr1G076880.12 , HORVU2Hr1G076880.15 , HORVU2Hr1G076880.14 , HORVU2Hr1G076880.17 , HORVU2Hr1G076880.16 , HORVU2Hr1G076880.5 , HORVU2Hr1G076880.7 , HORVU2Hr1G076880.6 , HORVU2Hr1G076880.1 , HORVU2Hr1G076880.2
Wheat TraesCS2A02G309100 , TraesCS2A02G309100 , TraesCS2B02G326200 , TraesCS2D02G307400
Populus PNT42741


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G301200 expressed protein -
2 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
3 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.001G180300 expressed protein -
5 Sobic.003G092200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
6 Sobic.004G227000 expressed protein -
7 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
8 Sobic.006G187600 DUF623 domain containing protein, expressed -
9 Sobic.006G005000 expressed protein -
10 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
11 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
12 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
14 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
15 Sobic.008G163600 expressed protein -
16 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
17 Sobic.003G200501 - K11252: histone H2B
18 Sobic.002G425900 expressed protein -
19 Sobic.003G235800 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
20 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G081300 Sobic007G081300 Sobic003G301200 Sobic003G301200 Sobic007G081300--Sobic003G301200 Sobic006G278400 Sobic006G278400 Sobic007G081300--Sobic006G278400 Sobic010G189800 Sobic010G189800 Sobic007G081300--Sobic010G189800 Sobic001G180300 Sobic001G180300 Sobic007G081300--Sobic001G180300 Sobic003G092200 Sobic003G092200 Sobic007G081300--Sobic003G092200 Sobic004G227000 Sobic004G227000 Sobic007G081300--Sobic004G227000 Sobic007G149600 Sobic007G149600 Sobic007G081300--Sobic007G149600 Sobic006G187600 Sobic006G187600 Sobic007G081300--Sobic006G187600 Sobic006G005000 Sobic006G005000 Sobic007G081300--Sobic006G005000 Sobic003G301200--Sobic007G081300 Sobic003G301200--Sobic006G278400 Sobic003G235800 Sobic003G235800 Sobic003G301200--Sobic003G235800 Sobic003G301200--Sobic001G180300 Sobic003G301200--Sobic004G227000 Sobic003G301200--Sobic010G189800 Sobic008G163600 Sobic008G163600 Sobic003G301200--Sobic008G163600 Sobic003G301200--Sobic006G005000 Sobic003G301200--Sobic006G187600 Sobic006G278400--Sobic004G227000 Sobic006G278400--Sobic001G180300 Sobic006G278400--Sobic003G301200 Sobic006G278400--Sobic008G163600 Sobic006G278400--Sobic007G081300 Sobic006G278400--Sobic006G187600 Sobic010G014200 Sobic010G014200 Sobic006G278400--Sobic010G014200 Sobic002G425900 Sobic002G425900 Sobic006G278400--Sobic002G425900 Sobic004G128600 Sobic004G128600 Sobic006G278400--Sobic004G128600 Sobic010G189800--Sobic007G081300 Sobic004G192700 Sobic004G192700 Sobic010G189800--Sobic004G192700 Sobic010G189800--Sobic003G092200 Sobic010G189800--Sobic006G187600 Sobic010G073300 Sobic010G073300 Sobic010G189800--Sobic010G073300 Sobic010G189800--Sobic007G149600 Sobic010G189800--Sobic004G227000 Sobic010G189800--Sobic003G301200 Sobic001G441800 Sobic001G441800 Sobic010G189800--Sobic001G441800 Sobic001G180300--Sobic006G187600 Sobic001G180300--Sobic004G227000 Sobic001G180300--Sobic006G278400 Sobic001G180300--Sobic010G014200 Sobic001G180300--Sobic003G092200 Sobic001G180300--Sobic002G425900 Sobic001G180300--Sobic008G163600 Sobic004G329100 Sobic004G329100 Sobic001G180300--Sobic004G329100 Sobic010G178900 Sobic010G178900 Sobic001G180300--Sobic010G178900 Sobic003G367401 Sobic003G367401 Sobic003G092200--Sobic003G367401 Sobic010G201000 Sobic010G201000 Sobic003G092200--Sobic010G201000 Sobic009G152901 Sobic009G152901 Sobic003G092200--Sobic009G152901 Sobic003G065001 Sobic003G065001 Sobic003G092200--Sobic003G065001 Sobic001G016900 Sobic001G016900 Sobic003G092200--Sobic001G016900 Sobic003G092200--Sobic001G441800 Sobic002G430200 Sobic002G430200 Sobic003G092200--Sobic002G430200 Sobic004G239000 Sobic004G239000 Sobic003G092200--Sobic004G239000 Sobic002G387100 Sobic002G387100 Sobic003G092200--Sobic002G387100 Sobic004G227000--Sobic006G278400 Sobic004G227000--Sobic001G180300 Sobic004G227000--Sobic002G425900 Sobic004G227000--Sobic006G187600 Sobic004G227000--Sobic004G128600 Sobic010G224800 Sobic010G224800 Sobic004G227000--Sobic010G224800 Sobic002G059200 Sobic002G059200 Sobic004G227000--Sobic002G059200 Sobic004G227000--Sobic004G329100 Sobic010G114400 Sobic010G114400 Sobic004G227000--Sobic010G114400 Sobic004G265400 Sobic004G265400 Sobic007G149600--Sobic004G265400 Sobic007G221800 Sobic007G221800 Sobic007G149600--Sobic007G221800 Sobic003G067300 Sobic003G067300 Sobic007G149600--Sobic003G067300 Sobic003G200501 Sobic003G200501 Sobic007G149600--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic007G149600--Sobic002G210200 Sobic003G350100 Sobic003G350100 Sobic007G149600--Sobic003G350100 Sobic003G067500 Sobic003G067500 Sobic007G149600--Sobic003G067500 Sobic002G284901 Sobic002G284901 Sobic007G149600--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic007G149600--Sobic001G193400 Sobic006G187600--Sobic001G180300 Sobic006G187600--Sobic004G227000 Sobic006G187600--Sobic002G425900 Sobic006G187600--Sobic003G092200 Sobic006G187600--Sobic010G178900 Sobic006G187600--Sobic010G224800 Sobic004G197300 Sobic004G197300 Sobic006G187600--Sobic004G197300 Sobic006G187600--Sobic010G114400 Sobic006G187600--Sobic001G441800 Sobic007G224600 Sobic007G224600 Sobic006G005000--Sobic007G224600 Sobic001G220200 Sobic001G220200 Sobic006G005000--Sobic001G220200 Sobic006G005000--Sobic007G221800 Sobic004G357033 Sobic004G357033 Sobic006G005000--Sobic004G357033 Sobic001G130900 Sobic001G130900 Sobic006G005000--Sobic001G130900 Sobic006G259201 Sobic006G259201 Sobic006G005000--Sobic006G259201 Sobic010G074980 Sobic010G074980 Sobic006G005000--Sobic010G074980 Sobic009G225300 Sobic009G225300 Sobic006G005000--Sobic009G225300 Sobic006G005000--Sobic004G192700
Octagon: transcription factors


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