Gene annotation
Transcriptome id Sobic.006G108000.1
Synonym Sb06g019060
Functional annotation formin, putative, expressed
UniProt C5Y9W0
Pfam PF02181
Panther DB PTHR23213 PTHR23213:SF219
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05470 : Actin-binding FH2 (formin homology 2) family protein
RAP-DB (Rice) LOC_Os04g38810.1 : formin, putative, expressed
MaizeGDB (Corn) Zm00025a011112
Brachypodium KQJ82990 , KQJ82991
Barley HORVU3Hr1G089510.1 , HORVU3Hr1G089510.2 , HORVU3Hr1G089510.3
Wheat TraesCS2B02G344200 , TraesCS2A02G337800 , TraesCS2D02G325200 , TraesCS3D02G391800 , TraesCS3D02G391800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
2 Sobic.001G331100 expressed protein -
3 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
4 Sobic.008G163800 expressed protein -
5 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
6 Sobic.002G221400 ZOS9-14 - C2H2 zinc finger protein, expressed -
7 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
8 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
9 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
10 Sobic.004G287500 expressed protein -
11 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
12 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
13 Sobic.009G190400 expressed protein -
14 Sobic.001G180300 expressed protein -
15 Sobic.002G229800 DUF617 domain containing protein, expressed -
16 Sobic.004G156600 - -
17 Sobic.004G227000 expressed protein -
18 Sobic.006G187600 DUF623 domain containing protein, expressed -
19 Sobic.003G301200 expressed protein -
20 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -


Gene co-expression network
sample Sobic006G108000 Sobic006G108000 Sobic003G406500 Sobic003G406500 Sobic006G108000--Sobic003G406500 Sobic001G331100 Sobic001G331100 Sobic006G108000--Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic006G108000--Sobic004G115600 Sobic008G163800 Sobic008G163800 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic009G254400 Sobic009G254400 Sobic006G108000--Sobic009G254400 Sobic003G040100 Sobic003G040100 Sobic006G108000--Sobic003G040100 Sobic007G153300 Sobic007G153300 Sobic006G108000--Sobic007G153300 Sobic003G406500--Sobic009G254400 Sobic003G406500--Sobic007G153300 Sobic003G406500--Sobic006G108000 Sobic003G406500--Sobic008G163800 Sobic003G006500 Sobic003G006500 Sobic003G406500--Sobic003G006500 Sobic001G263500 Sobic001G263500 Sobic003G406500--Sobic001G263500 Sobic003G359200 Sobic003G359200 Sobic003G406500--Sobic003G359200 Sobic003G406500--Sobic001G331100 Sobic010G209800 Sobic010G209800 Sobic003G406500--Sobic010G209800 Sobic001G331100--Sobic004G115600 Sobic001G331100--Sobic006G108000 Sobic002G279300 Sobic002G279300 Sobic001G331100--Sobic002G279300 Sobic001G331100--Sobic009G254400 Sobic006G155900 Sobic006G155900 Sobic001G331100--Sobic006G155900 Sobic001G331100--Sobic008G163800 Sobic001G331100--Sobic003G406500 Sobic001G331100--Sobic003G040100 Sobic001G331100--Sobic001G263500 Sobic004G115600--Sobic002G279300 Sobic004G115600--Sobic001G331100 Sobic006G278400 Sobic006G278400 Sobic004G115600--Sobic006G278400 Sobic004G115600--Sobic006G108000 Sobic004G227000 Sobic004G227000 Sobic004G115600--Sobic004G227000 Sobic001G458900 Sobic001G458900 Sobic004G115600--Sobic001G458900 Sobic003G301200 Sobic003G301200 Sobic004G115600--Sobic003G301200 Sobic003G300100 Sobic003G300100 Sobic004G115600--Sobic003G300100 Sobic003G047200 Sobic003G047200 Sobic004G115600--Sobic003G047200 Sobic008G031600 Sobic008G031600 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic010G014900 Sobic010G014900 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic007G158400 Sobic007G158400 Sobic008G163800--Sobic007G158400 Sobic004G061600 Sobic004G061600 Sobic008G163800--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic008G163800--Sobic003G390300 Sobic004G107400 Sobic004G107400 Sobic008G163800--Sobic004G107400 Sobic010G029200 Sobic010G029200 Sobic008G163800--Sobic010G029200 Sobic006G245200--Sobic006G108000 Sobic006G186200 Sobic006G186200 Sobic006G245200--Sobic006G186200 Sobic006G245200--Sobic008G163800 Sobic006G245200--Sobic003G406500 Sobic006G245200--Sobic007G153300 Sobic004G156600 Sobic004G156600 Sobic006G245200--Sobic004G156600 Sobic006G245200--Sobic004G061600 Sobic003G377200 Sobic003G377200 Sobic006G245200--Sobic003G377200 Sobic006G245200--Sobic004G107400 Sobic002G221400--Sobic006G108000 Sobic002G221400--Sobic004G115600 Sobic004G266800 Sobic004G266800 Sobic002G221400--Sobic004G266800 Sobic006G163600 Sobic006G163600 Sobic002G221400--Sobic006G163600 Sobic006G147900 Sobic006G147900 Sobic002G221400--Sobic006G147900 Sobic002G221400--Sobic006G278400 Sobic002G221400--Sobic003G406500 Sobic002G221400--Sobic003G301200 Sobic002G221400--Sobic001G331100 Sobic009G254400--Sobic001G263500 Sobic009G254400--Sobic003G406500 Sobic009G254400--Sobic008G163800 Sobic002G330800 Sobic002G330800 Sobic009G254400--Sobic002G330800 Sobic009G254400--Sobic001G331100 Sobic010G179000 Sobic010G179000 Sobic009G254400--Sobic010G179000 Sobic009G254400--Sobic006G108000 Sobic009G254400--Sobic006G278400 Sobic006G079100 Sobic006G079100 Sobic009G254400--Sobic006G079100 Sobic009G190400 Sobic009G190400 Sobic003G040100--Sobic009G190400 Sobic008G020500 Sobic008G020500 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic004G198200 Sobic004G198200 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic001G494300 Sobic001G494300 Sobic003G040100--Sobic001G494300 Sobic003G040100--Sobic003G390300 Sobic003G415500 Sobic003G415500 Sobic003G040100--Sobic003G415500 Sobic003G040100--Sobic004G061600 Sobic007G153300--Sobic003G359200 Sobic007G153300--Sobic003G406500 Sobic007G153300--Sobic003G006500 Sobic007G153300--Sobic004G061600 Sobic007G153300--Sobic004G156600 Sobic007G153300--Sobic003G390300 Sobic007G153300--Sobic008G163800 Sobic001G062700 Sobic001G062700 Sobic007G153300--Sobic001G062700 Sobic008G136900 Sobic008G136900 Sobic007G153300--Sobic008G136900
Octagon: transcription factors


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