Gene annotation
Transcriptome id Sobic.002G221400.1,Sobic.002G221400.2
Synonym Sb02g026230, ATIDD15, SGR5
Functional annotation ZOS9-14 - C2H2 zinc finger protein, expressed
UniProt A0A1W0W5I3 , C5X268
Pfam -
Panther DB PTHR10593 PTHR10593:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25250 : indeterminate(ID)-domain 16
RAP-DB (Rice) LOC_Os09g27650.2 : ZOS9-14 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a001483 , Zm00025a005392 , Zm00025a036023 , Zm00025a023015 , Zm00025a052944 , Zm00025a014047 , Zm00025a047221 , Zm00025a035820
Brachypodium KQJ90469 , KQK22673 , PNT68259 , PNT68255 , PNT68256 , KQJ98591 , KQJ98590 , PNT64697 , KQJ90470
Barley HORVU4Hr1G064740.6 , HORVU4Hr1G064740.5 , HORVU4Hr1G064740.4 , HORVU4Hr1G064740.3 , HORVU4Hr1G064740.2
Wheat TraesCS3B02G237700 , TraesCS5B02G232200 , TraesCS3A02G205800 , TraesCS4B02G230800 , TraesCS4D02G232000 , TraesCS5A02G233700 , TraesCS5D02G240600 , TraesCS3B02G195900 , TraesCS4A02G074700 , TraesCS3D02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G108000 formin, putative, expressed -
2 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
3 Sobic.004G266800 ZF-HD protein dimerisation region containing protein, expressed -
4 Sobic.006G163600 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.006G147900 expressed protein -
6 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
7 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
8 Sobic.003G301200 expressed protein -
9 Sobic.001G331100 expressed protein -
10 Sobic.010G202100 expressed protein -
11 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.004G155900 heavy metal-associated domain containing protein, expressed -
13 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
14 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
15 Sobic.004G227000 expressed protein -
16 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
17 Sobic.002G293800 expressed protein -
18 Sobic.010G234800 expressed protein -
19 Sobic.001G458900 targeting protein-related, putative, expressed -
20 Sobic.003G300701 - -


Gene co-expression network
sample Sobic002G221400 Sobic002G221400 Sobic006G108000 Sobic006G108000 Sobic002G221400--Sobic006G108000 Sobic004G115600 Sobic004G115600 Sobic002G221400--Sobic004G115600 Sobic004G266800 Sobic004G266800 Sobic002G221400--Sobic004G266800 Sobic006G163600 Sobic006G163600 Sobic002G221400--Sobic006G163600 Sobic006G147900 Sobic006G147900 Sobic002G221400--Sobic006G147900 Sobic006G278400 Sobic006G278400 Sobic002G221400--Sobic006G278400 Sobic003G406500 Sobic003G406500 Sobic002G221400--Sobic003G406500 Sobic003G301200 Sobic003G301200 Sobic002G221400--Sobic003G301200 Sobic001G331100 Sobic001G331100 Sobic002G221400--Sobic001G331100 Sobic006G108000--Sobic003G406500 Sobic006G108000--Sobic001G331100 Sobic006G108000--Sobic004G115600 Sobic008G163800 Sobic008G163800 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic006G108000--Sobic002G221400 Sobic009G254400 Sobic009G254400 Sobic006G108000--Sobic009G254400 Sobic003G040100 Sobic003G040100 Sobic006G108000--Sobic003G040100 Sobic007G153300 Sobic007G153300 Sobic006G108000--Sobic007G153300 Sobic002G279300 Sobic002G279300 Sobic004G115600--Sobic002G279300 Sobic004G115600--Sobic001G331100 Sobic004G115600--Sobic006G278400 Sobic004G115600--Sobic006G108000 Sobic004G227000 Sobic004G227000 Sobic004G115600--Sobic004G227000 Sobic001G458900 Sobic001G458900 Sobic004G115600--Sobic001G458900 Sobic004G115600--Sobic003G301200 Sobic003G300100 Sobic003G300100 Sobic004G115600--Sobic003G300100 Sobic003G047200 Sobic003G047200 Sobic004G115600--Sobic003G047200 Sobic002G279400 Sobic002G279400 Sobic004G266800--Sobic002G279400 Sobic004G266800--Sobic002G221400 Sobic004G108400 Sobic004G108400 Sobic004G266800--Sobic004G108400 Sobic004G313900 Sobic004G313900 Sobic004G266800--Sobic004G313900 Sobic003G387300 Sobic003G387300 Sobic004G266800--Sobic003G387300 Sobic004G266800--Sobic006G147900 Sobic002G394200 Sobic002G394200 Sobic004G266800--Sobic002G394200 Sobic009G057800 Sobic009G057800 Sobic004G266800--Sobic009G057800 Sobic009G188500 Sobic009G188500 Sobic004G266800--Sobic009G188500 Sobic006G163600--Sobic003G301200 Sobic010G189800 Sobic010G189800 Sobic006G163600--Sobic010G189800 Sobic007G081300 Sobic007G081300 Sobic006G163600--Sobic007G081300 Sobic010G191100 Sobic010G191100 Sobic006G163600--Sobic010G191100 Sobic006G163600--Sobic002G221400 Sobic006G163600--Sobic006G278400 Sobic008G137500 Sobic008G137500 Sobic006G163600--Sobic008G137500 Sobic004G155900 Sobic004G155900 Sobic006G163600--Sobic004G155900 Sobic006G247500 Sobic006G247500 Sobic006G163600--Sobic006G247500 Sobic006G147900--Sobic004G108400 Sobic006G147900--Sobic002G221400 Sobic006G147900--Sobic004G266800 Sobic006G147900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic006G147900--Sobic004G329000 Sobic003G251700 Sobic003G251700 Sobic006G147900--Sobic003G251700 Sobic002G286100 Sobic002G286100 Sobic006G147900--Sobic002G286100 Sobic009G257900 Sobic009G257900 Sobic006G147900--Sobic009G257900 Sobic006G147900--Sobic006G163600 Sobic006G278400--Sobic004G227000 Sobic001G180300 Sobic001G180300 Sobic006G278400--Sobic001G180300 Sobic006G278400--Sobic003G301200 Sobic008G163600 Sobic008G163600 Sobic006G278400--Sobic008G163600 Sobic006G278400--Sobic007G081300 Sobic006G187600 Sobic006G187600 Sobic006G278400--Sobic006G187600 Sobic010G014200 Sobic010G014200 Sobic006G278400--Sobic010G014200 Sobic002G425900 Sobic002G425900 Sobic006G278400--Sobic002G425900 Sobic004G128600 Sobic004G128600 Sobic006G278400--Sobic004G128600 Sobic003G406500--Sobic009G254400 Sobic003G406500--Sobic007G153300 Sobic003G406500--Sobic006G108000 Sobic003G406500--Sobic008G163800 Sobic003G006500 Sobic003G006500 Sobic003G406500--Sobic003G006500 Sobic001G263500 Sobic001G263500 Sobic003G406500--Sobic001G263500 Sobic003G359200 Sobic003G359200 Sobic003G406500--Sobic003G359200 Sobic003G406500--Sobic001G331100 Sobic010G209800 Sobic010G209800 Sobic003G406500--Sobic010G209800 Sobic003G301200--Sobic007G081300 Sobic003G301200--Sobic006G278400 Sobic003G235800 Sobic003G235800 Sobic003G301200--Sobic003G235800 Sobic003G301200--Sobic001G180300 Sobic003G301200--Sobic004G227000 Sobic003G301200--Sobic010G189800 Sobic003G301200--Sobic008G163600 Sobic006G005000 Sobic006G005000 Sobic003G301200--Sobic006G005000 Sobic003G301200--Sobic006G187600 Sobic001G331100--Sobic004G115600 Sobic001G331100--Sobic006G108000 Sobic001G331100--Sobic002G279300 Sobic001G331100--Sobic009G254400 Sobic006G155900 Sobic006G155900 Sobic001G331100--Sobic006G155900 Sobic001G331100--Sobic008G163800 Sobic001G331100--Sobic003G406500 Sobic001G331100--Sobic003G040100 Sobic001G331100--Sobic001G263500
Octagon: transcription factors


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