Gene annotation
Transcriptome id Sobic.006G245200.1
Synonym Sb06g031090
Functional annotation OsFBX239 - F-box domain containing protein, expressed
UniProt A0A1B6PNN8
Pfam PF00646
Panther DB PTHR35546 PTHR35546:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35070.1 : OsFBX239 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045228 , Zm00025a045229 , Zm00025a045220 , Zm00025a045219 , Zm00025a045232 , Zm00025a045234 , Zm00025a026428
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G245200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G108000 formin, putative, expressed -
2 Sobic.006G186200 exostosin family domain containing protein, expressed -
3 Sobic.008G163800 expressed protein -
4 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
5 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
6 Sobic.004G156600 - -
7 Sobic.004G061600 expressed protein -
8 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.004G107400 expressed protein -
10 Sobic.006G273500 expressed protein -
11 Sobic.001G331100 expressed protein -
12 Sobic.003G390300 expressed protein -
13 Sobic.006G163650 - -
14 Sobic.007G208500 expressed protein -
15 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
16 Sobic.007G158400 DUF617 domain containing protein, expressed -
17 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
18 Sobic.010G014900 expressed protein -
19 Sobic.005G168500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
20 Sobic.008G031600 expressed protein -


Gene co-expression network
sample Sobic006G245200 Sobic006G245200 Sobic006G108000 Sobic006G108000 Sobic006G245200--Sobic006G108000 Sobic006G186200 Sobic006G186200 Sobic006G245200--Sobic006G186200 Sobic008G163800 Sobic008G163800 Sobic006G245200--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic006G245200--Sobic003G406500 Sobic007G153300 Sobic007G153300 Sobic006G245200--Sobic007G153300 Sobic004G156600 Sobic004G156600 Sobic006G245200--Sobic004G156600 Sobic004G061600 Sobic004G061600 Sobic006G245200--Sobic004G061600 Sobic003G377200 Sobic003G377200 Sobic006G245200--Sobic003G377200 Sobic004G107400 Sobic004G107400 Sobic006G245200--Sobic004G107400 Sobic006G108000--Sobic003G406500 Sobic001G331100 Sobic001G331100 Sobic006G108000--Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic006G108000--Sobic004G115600 Sobic006G108000--Sobic008G163800 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic009G254400 Sobic009G254400 Sobic006G108000--Sobic009G254400 Sobic003G040100 Sobic003G040100 Sobic006G108000--Sobic003G040100 Sobic006G108000--Sobic007G153300 Sobic006G273500 Sobic006G273500 Sobic006G186200--Sobic006G273500 Sobic006G186200--Sobic004G061600 Sobic006G186200--Sobic004G107400 Sobic003G390300 Sobic003G390300 Sobic006G186200--Sobic003G390300 Sobic010G014900 Sobic010G014900 Sobic006G186200--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic006G186200--Sobic007G158400 Sobic006G186200--Sobic004G156600 Sobic003G290700 Sobic003G290700 Sobic006G186200--Sobic003G290700 Sobic001G137200 Sobic001G137200 Sobic006G186200--Sobic001G137200 Sobic008G031600 Sobic008G031600 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic008G163800--Sobic007G158400 Sobic008G163800--Sobic004G061600 Sobic008G163800--Sobic003G390300 Sobic008G163800--Sobic004G107400 Sobic010G029200 Sobic010G029200 Sobic008G163800--Sobic010G029200 Sobic003G406500--Sobic009G254400 Sobic003G406500--Sobic007G153300 Sobic003G406500--Sobic006G108000 Sobic003G406500--Sobic008G163800 Sobic003G006500 Sobic003G006500 Sobic003G406500--Sobic003G006500 Sobic001G263500 Sobic001G263500 Sobic003G406500--Sobic001G263500 Sobic003G359200 Sobic003G359200 Sobic003G406500--Sobic003G359200 Sobic003G406500--Sobic001G331100 Sobic010G209800 Sobic010G209800 Sobic003G406500--Sobic010G209800 Sobic007G153300--Sobic003G359200 Sobic007G153300--Sobic003G406500 Sobic007G153300--Sobic003G006500 Sobic007G153300--Sobic004G061600 Sobic007G153300--Sobic004G156600 Sobic007G153300--Sobic003G390300 Sobic007G153300--Sobic008G163800 Sobic001G062700 Sobic001G062700 Sobic007G153300--Sobic001G062700 Sobic008G136900 Sobic008G136900 Sobic007G153300--Sobic008G136900 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic004G156600--Sobic006G186200 Sobic004G156600--Sobic004G061600 Sobic004G156600--Sobic004G107400 Sobic004G156600--Sobic008G136900 Sobic004G156600--Sobic001G062700 Sobic004G156600--Sobic003G040100 Sobic007G076800 Sobic007G076800 Sobic004G156600--Sobic007G076800 Sobic004G061600--Sobic003G390300 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic005G168500 Sobic005G168500 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic004G061600--Sobic006G273500 Sobic001G267500 Sobic001G267500 Sobic003G377200--Sobic001G267500 Sobic007G208500 Sobic007G208500 Sobic003G377200--Sobic007G208500 Sobic003G377200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic003G377200--Sobic006G163650 Sobic004G180600 Sobic004G180600 Sobic003G377200--Sobic004G180600 Sobic003G377200--Sobic003G390300 Sobic009G203400 Sobic009G203400 Sobic003G377200--Sobic009G203400 Sobic005G076650 Sobic005G076650 Sobic003G377200--Sobic005G076650 Sobic003G377200--Sobic004G156600 Sobic006G171000 Sobic006G171000 Sobic004G107400--Sobic006G171000 Sobic004G107400--Sobic010G014900 Sobic004G107400--Sobic001G137200 Sobic004G107400--Sobic003G390300 Sobic005G209800 Sobic005G209800 Sobic004G107400--Sobic005G209800 Sobic002G078850 Sobic002G078850 Sobic004G107400--Sobic002G078850 Sobic003G104900 Sobic003G104900 Sobic004G107400--Sobic003G104900 Sobic005G231800 Sobic005G231800 Sobic004G107400--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic004G107400--Sobic008G002100
Octagon: transcription factors


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