Gene annotation
Transcriptome id Sobic.003G406500.1
Synonym Sb03g044150
Functional annotation antifreeze glycoprotein, putative, expressed
UniProt C5XGB8
Pfam -
Panther DB PTHR35132 PTHR35132:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22190 : -
RAP-DB (Rice) LOC_Os01g69290.1 : antifreeze glycoprotein, putative, expressed
MaizeGDB (Corn) Zm00025a026246
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
2 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
3 Sobic.006G108000 formin, putative, expressed -
4 Sobic.008G163800 expressed protein -
5 Sobic.003G006500 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.001G263500 glycosyl hydrolases family 17, putative, expressed -
7 Sobic.003G359200 DUF740 domain containing protein, expressed -
8 Sobic.001G331100 expressed protein -
9 Sobic.010G209800 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
10 Sobic.005G168500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
11 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
12 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
13 Sobic.009G136600 peptide transporter PTR2, putative, expressed -
14 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
15 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
16 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
17 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
18 Sobic.010G014900 expressed protein -
19 Sobic.002G221400 ZOS9-14 - C2H2 zinc finger protein, expressed -
20 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -


Gene co-expression network
sample Sobic003G406500 Sobic003G406500 Sobic009G254400 Sobic009G254400 Sobic003G406500--Sobic009G254400 Sobic007G153300 Sobic007G153300 Sobic003G406500--Sobic007G153300 Sobic006G108000 Sobic006G108000 Sobic003G406500--Sobic006G108000 Sobic008G163800 Sobic008G163800 Sobic003G406500--Sobic008G163800 Sobic003G006500 Sobic003G006500 Sobic003G406500--Sobic003G006500 Sobic001G263500 Sobic001G263500 Sobic003G406500--Sobic001G263500 Sobic003G359200 Sobic003G359200 Sobic003G406500--Sobic003G359200 Sobic001G331100 Sobic001G331100 Sobic003G406500--Sobic001G331100 Sobic010G209800 Sobic010G209800 Sobic003G406500--Sobic010G209800 Sobic009G254400--Sobic001G263500 Sobic009G254400--Sobic003G406500 Sobic009G254400--Sobic008G163800 Sobic002G330800 Sobic002G330800 Sobic009G254400--Sobic002G330800 Sobic009G254400--Sobic001G331100 Sobic010G179000 Sobic010G179000 Sobic009G254400--Sobic010G179000 Sobic009G254400--Sobic006G108000 Sobic006G278400 Sobic006G278400 Sobic009G254400--Sobic006G278400 Sobic006G079100 Sobic006G079100 Sobic009G254400--Sobic006G079100 Sobic007G153300--Sobic003G359200 Sobic007G153300--Sobic003G406500 Sobic007G153300--Sobic003G006500 Sobic004G061600 Sobic004G061600 Sobic007G153300--Sobic004G061600 Sobic004G156600 Sobic004G156600 Sobic007G153300--Sobic004G156600 Sobic003G390300 Sobic003G390300 Sobic007G153300--Sobic003G390300 Sobic007G153300--Sobic008G163800 Sobic001G062700 Sobic001G062700 Sobic007G153300--Sobic001G062700 Sobic008G136900 Sobic008G136900 Sobic007G153300--Sobic008G136900 Sobic006G108000--Sobic003G406500 Sobic006G108000--Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic006G108000--Sobic004G115600 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic006G108000--Sobic009G254400 Sobic003G040100 Sobic003G040100 Sobic006G108000--Sobic003G040100 Sobic006G108000--Sobic007G153300 Sobic008G031600 Sobic008G031600 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic010G014900 Sobic010G014900 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic007G158400 Sobic007G158400 Sobic008G163800--Sobic007G158400 Sobic008G163800--Sobic004G061600 Sobic008G163800--Sobic003G390300 Sobic004G107400 Sobic004G107400 Sobic008G163800--Sobic004G107400 Sobic010G029200 Sobic010G029200 Sobic008G163800--Sobic010G029200 Sobic003G006500--Sobic007G158400 Sobic003G006500--Sobic010G014900 Sobic005G168500 Sobic005G168500 Sobic003G006500--Sobic005G168500 Sobic003G006500--Sobic004G061600 Sobic003G006500--Sobic008G136900 Sobic003G006500--Sobic007G153300 Sobic003G006500--Sobic004G107400 Sobic003G006500--Sobic003G359200 Sobic003G006500--Sobic003G390300 Sobic001G263500--Sobic009G254400 Sobic001G263500--Sobic008G163800 Sobic001G263500--Sobic010G179000 Sobic001G263500--Sobic006G079100 Sobic010G161300 Sobic010G161300 Sobic001G263500--Sobic010G161300 Sobic001G263500--Sobic003G406500 Sobic001G263500--Sobic008G031600 Sobic001G263500--Sobic006G278400 Sobic001G263500--Sobic001G331100 Sobic003G359200--Sobic007G153300 Sobic003G359200--Sobic004G107400 Sobic003G359200--Sobic010G014900 Sobic003G359200--Sobic001G062700 Sobic003G359200--Sobic003G390300 Sobic003G359200--Sobic007G158400 Sobic003G359200--Sobic003G006500 Sobic003G359200--Sobic008G163800 Sobic003G359200--Sobic005G168500 Sobic001G331100--Sobic004G115600 Sobic001G331100--Sobic006G108000 Sobic002G279300 Sobic002G279300 Sobic001G331100--Sobic002G279300 Sobic001G331100--Sobic009G254400 Sobic006G155900 Sobic006G155900 Sobic001G331100--Sobic006G155900 Sobic001G331100--Sobic008G163800 Sobic001G331100--Sobic003G406500 Sobic001G331100--Sobic003G040100 Sobic001G331100--Sobic001G263500 Sobic002G035500 Sobic002G035500 Sobic010G209800--Sobic002G035500 Sobic010G209800--Sobic003G406500 Sobic010G209800--Sobic007G153300 Sobic010G234900 Sobic010G234900 Sobic010G209800--Sobic010G234900 Sobic004G336700 Sobic004G336700 Sobic010G209800--Sobic004G336700 Sobic010G209800--Sobic003G359200 Sobic001G494300 Sobic001G494300 Sobic010G209800--Sobic001G494300 Sobic002G202500 Sobic002G202500 Sobic010G209800--Sobic002G202500 Sobic007G038000 Sobic007G038000 Sobic010G209800--Sobic007G038000
Octagon: transcription factors


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