Gene annotation
Transcriptome id Sobic.003G300701.1
Synonym -
Functional annotation -
UniProt A0A1W0VZK9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G417000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
2 Sobic.010G013100 expressed protein -
3 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
4 Sobic.003G301200 expressed protein -
5 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
6 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
7 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
8 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
9 Sobic.003G235800 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
10 Sobic.004G227000 expressed protein -
11 Sobic.001G416800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
12 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
14 Sobic.002G416000 pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.006G005000 expressed protein -
16 Sobic.003G127600 ubiquitin-conjugating enzyme, putative, expressed K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
17 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
18 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
19 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
20 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B


Gene co-expression network
sample Sobic003G300701 Sobic003G300701 Sobic001G417000 Sobic001G417000 Sobic003G300701--Sobic001G417000 Sobic010G013100 Sobic010G013100 Sobic003G300701--Sobic010G013100 Sobic001G416900 Sobic001G416900 Sobic003G300701--Sobic001G416900 Sobic003G301200 Sobic003G301200 Sobic003G300701--Sobic003G301200 Sobic007G081300 Sobic007G081300 Sobic003G300701--Sobic007G081300 Sobic001G158000 Sobic001G158000 Sobic003G300701--Sobic001G158000 Sobic002G059200 Sobic002G059200 Sobic003G300701--Sobic002G059200 Sobic004G265400 Sobic004G265400 Sobic003G300701--Sobic004G265400 Sobic003G235800 Sobic003G235800 Sobic003G300701--Sobic003G235800 Sobic001G417000--Sobic003G300701 Sobic001G417000--Sobic001G416900 Sobic001G416800 Sobic001G416800 Sobic001G417000--Sobic001G416800 Sobic001G417000--Sobic002G059200 Sobic001G417000--Sobic010G013100 Sobic002G403400 Sobic002G403400 Sobic001G417000--Sobic002G403400 Sobic002G056300 Sobic002G056300 Sobic001G417000--Sobic002G056300 Sobic001G417000--Sobic001G158000 Sobic003G127600 Sobic003G127600 Sobic001G417000--Sobic003G127600 Sobic010G013100--Sobic003G300701 Sobic010G013100--Sobic001G416900 Sobic010G013100--Sobic001G417000 Sobic009G167500 Sobic009G167500 Sobic010G013100--Sobic009G167500 Sobic007G168400 Sobic007G168400 Sobic010G013100--Sobic007G168400 Sobic001G009700 Sobic001G009700 Sobic010G013100--Sobic001G009700 Sobic001G216800 Sobic001G216800 Sobic010G013100--Sobic001G216800 Sobic004G300701 Sobic004G300701 Sobic010G013100--Sobic004G300701 Sobic004G259700 Sobic004G259700 Sobic010G013100--Sobic004G259700 Sobic001G416900--Sobic001G416800 Sobic001G416900--Sobic003G127600 Sobic001G416900--Sobic001G417000 Sobic001G416900--Sobic002G059200 Sobic009G123000 Sobic009G123000 Sobic001G416900--Sobic009G123000 Sobic002G209300 Sobic002G209300 Sobic001G416900--Sobic002G209300 Sobic001G416900--Sobic002G403400 Sobic001G416900--Sobic002G056300 Sobic001G416900--Sobic003G300701 Sobic003G301200--Sobic007G081300 Sobic006G278400 Sobic006G278400 Sobic003G301200--Sobic006G278400 Sobic003G301200--Sobic003G235800 Sobic001G180300 Sobic001G180300 Sobic003G301200--Sobic001G180300 Sobic004G227000 Sobic004G227000 Sobic003G301200--Sobic004G227000 Sobic010G189800 Sobic010G189800 Sobic003G301200--Sobic010G189800 Sobic008G163600 Sobic008G163600 Sobic003G301200--Sobic008G163600 Sobic006G005000 Sobic006G005000 Sobic003G301200--Sobic006G005000 Sobic006G187600 Sobic006G187600 Sobic003G301200--Sobic006G187600 Sobic007G081300--Sobic003G301200 Sobic007G081300--Sobic006G278400 Sobic007G081300--Sobic010G189800 Sobic007G081300--Sobic001G180300 Sobic003G092200 Sobic003G092200 Sobic007G081300--Sobic003G092200 Sobic007G081300--Sobic004G227000 Sobic007G149600 Sobic007G149600 Sobic007G081300--Sobic007G149600 Sobic007G081300--Sobic006G187600 Sobic007G081300--Sobic006G005000 Sobic007G221800 Sobic007G221800 Sobic001G158000--Sobic007G221800 Sobic002G326050 Sobic002G326050 Sobic001G158000--Sobic002G326050 Sobic001G158000--Sobic004G265400 Sobic001G519300 Sobic001G519300 Sobic001G158000--Sobic001G519300 Sobic007G224600 Sobic007G224600 Sobic001G158000--Sobic007G224600 Sobic001G158000--Sobic007G149600 Sobic003G067500 Sobic003G067500 Sobic001G158000--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic001G158000--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic001G158000--Sobic002G210200 Sobic002G059200--Sobic002G403400 Sobic003G350100 Sobic003G350100 Sobic002G059200--Sobic003G350100 Sobic002G059200--Sobic004G265400 Sobic002G059200--Sobic007G149600 Sobic001G193400 Sobic001G193400 Sobic002G059200--Sobic001G193400 Sobic003G067300 Sobic003G067300 Sobic002G059200--Sobic003G067300 Sobic002G059200--Sobic002G056300 Sobic002G059200--Sobic007G221800 Sobic002G059200--Sobic003G067500 Sobic004G265400--Sobic007G149600 Sobic004G265400--Sobic007G221800 Sobic004G265400--Sobic003G350100 Sobic004G265400--Sobic003G067300 Sobic004G265400--Sobic003G067500 Sobic004G265400--Sobic003G200501 Sobic004G265400--Sobic002G210200 Sobic004G265400--Sobic001G193400 Sobic004G265400--Sobic002G059200 Sobic003G235800--Sobic003G301200 Sobic006G259201 Sobic006G259201 Sobic003G235800--Sobic006G259201 Sobic006G227800 Sobic006G227800 Sobic003G235800--Sobic006G227800 Sobic003G235800--Sobic006G005000 Sobic003G235800--Sobic007G081300 Sobic002G416000 Sobic002G416000 Sobic003G235800--Sobic002G416000 Sobic004G155900 Sobic004G155900 Sobic003G235800--Sobic004G155900 Sobic003G235800--Sobic007G221800 Sobic004G055800 Sobic004G055800 Sobic003G235800--Sobic004G055800
Octagon: transcription factors


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