Gene annotation
Transcriptome id Sobic.010G013100.1
Synonym Sb10g001300
Functional annotation expressed protein
UniProt C5Z2U4
Pfam -
Panther DB PTHR35103
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28310 : -
RAP-DB (Rice) LOC_Os06g02530.1 : expressed protein
MaizeGDB (Corn) Zm00025a041308 , Zm00025a026615 , Zm00025a050247
Brachypodium KQK19806
Barley HORVU7Hr1G008430.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G300701 - -
2 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
3 Sobic.001G417000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
5 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G009700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.001G216800 expressed protein -
8 Sobic.004G300701 - -
9 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
10 Sobic.010G099400 metalloendoproteinase 1 precursor, putative, expressed -
11 Sobic.001G416800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
12 Sobic.003G127600 ubiquitin-conjugating enzyme, putative, expressed K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
13 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
14 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
15 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
16 Sobic.001G511200 expressed protein -
17 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
19 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
20 Sobic.003G057366 - K11254: histone H4


Gene co-expression network
sample Sobic010G013100 Sobic010G013100 Sobic003G300701 Sobic003G300701 Sobic010G013100--Sobic003G300701 Sobic001G416900 Sobic001G416900 Sobic010G013100--Sobic001G416900 Sobic001G417000 Sobic001G417000 Sobic010G013100--Sobic001G417000 Sobic009G167500 Sobic009G167500 Sobic010G013100--Sobic009G167500 Sobic007G168400 Sobic007G168400 Sobic010G013100--Sobic007G168400 Sobic001G009700 Sobic001G009700 Sobic010G013100--Sobic001G009700 Sobic001G216800 Sobic001G216800 Sobic010G013100--Sobic001G216800 Sobic004G300701 Sobic004G300701 Sobic010G013100--Sobic004G300701 Sobic004G259700 Sobic004G259700 Sobic010G013100--Sobic004G259700 Sobic003G300701--Sobic001G417000 Sobic003G300701--Sobic010G013100 Sobic003G300701--Sobic001G416900 Sobic003G301200 Sobic003G301200 Sobic003G300701--Sobic003G301200 Sobic007G081300 Sobic007G081300 Sobic003G300701--Sobic007G081300 Sobic001G158000 Sobic001G158000 Sobic003G300701--Sobic001G158000 Sobic002G059200 Sobic002G059200 Sobic003G300701--Sobic002G059200 Sobic004G265400 Sobic004G265400 Sobic003G300701--Sobic004G265400 Sobic003G235800 Sobic003G235800 Sobic003G300701--Sobic003G235800 Sobic001G416800 Sobic001G416800 Sobic001G416900--Sobic001G416800 Sobic003G127600 Sobic003G127600 Sobic001G416900--Sobic003G127600 Sobic001G416900--Sobic001G417000 Sobic001G416900--Sobic002G059200 Sobic009G123000 Sobic009G123000 Sobic001G416900--Sobic009G123000 Sobic002G209300 Sobic002G209300 Sobic001G416900--Sobic002G209300 Sobic002G403400 Sobic002G403400 Sobic001G416900--Sobic002G403400 Sobic002G056300 Sobic002G056300 Sobic001G416900--Sobic002G056300 Sobic001G416900--Sobic003G300701 Sobic001G417000--Sobic003G300701 Sobic001G417000--Sobic001G416900 Sobic001G417000--Sobic001G416800 Sobic001G417000--Sobic002G059200 Sobic001G417000--Sobic010G013100 Sobic001G417000--Sobic002G403400 Sobic001G417000--Sobic002G056300 Sobic001G417000--Sobic001G158000 Sobic001G417000--Sobic003G127600 Sobic009G167500--Sobic001G009700 Sobic003G057366 Sobic003G057366 Sobic009G167500--Sobic003G057366 Sobic009G167500--Sobic001G416900 Sobic009G167500--Sobic004G259700 Sobic002G276000 Sobic002G276000 Sobic009G167500--Sobic002G276000 Sobic009G167500--Sobic010G013100 Sobic003G057100 Sobic003G057100 Sobic009G167500--Sobic003G057100 Sobic001G054800 Sobic001G054800 Sobic009G167500--Sobic001G054800 Sobic009G167500--Sobic003G127600 Sobic007G168400--Sobic004G259700 Sobic007G168400--Sobic010G013100 Sobic007G168400--Sobic001G416900 Sobic004G099500 Sobic004G099500 Sobic007G168400--Sobic004G099500 Sobic007G168400--Sobic009G167500 Sobic007G168400--Sobic002G276000 Sobic003G057600 Sobic003G057600 Sobic007G168400--Sobic003G057600 Sobic007G168400--Sobic001G054800 Sobic007G168400--Sobic001G009700 Sobic001G009700--Sobic009G167500 Sobic001G009700--Sobic002G276000 Sobic001G009700--Sobic001G054800 Sobic001G009700--Sobic003G057100 Sobic002G210500 Sobic002G210500 Sobic001G009700--Sobic002G210500 Sobic001G009700--Sobic003G057366 Sobic001G009700--Sobic010G013100 Sobic001G009700--Sobic004G099500 Sobic003G338966 Sobic003G338966 Sobic001G009700--Sobic003G338966 Sobic001G216800--Sobic001G416900 Sobic004G025200 Sobic004G025200 Sobic001G216800--Sobic004G025200 Sobic001G080600 Sobic001G080600 Sobic001G216800--Sobic001G080600 Sobic001G216800--Sobic010G013100 Sobic001G430000 Sobic001G430000 Sobic001G216800--Sobic001G430000 Sobic001G216800--Sobic002G209300 Sobic003G184500 Sobic003G184500 Sobic001G216800--Sobic003G184500 Sobic003G399400 Sobic003G399400 Sobic001G216800--Sobic003G399400 Sobic010G099400 Sobic010G099400 Sobic001G216800--Sobic010G099400 Sobic003G283500 Sobic003G283500 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic004G300701--Sobic001G430000 Sobic004G300701--Sobic010G099400 Sobic004G342900 Sobic004G342900 Sobic004G300701--Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic004G300701--Sobic003G337100 Sobic004G300701--Sobic010G013100 Sobic005G016600 Sobic005G016600 Sobic004G300701--Sobic005G016600 Sobic003G201300 Sobic003G201300 Sobic004G300701--Sobic003G201300 Sobic004G259700--Sobic001G416900 Sobic004G259700--Sobic009G167500 Sobic004G259700--Sobic009G123000 Sobic004G259700--Sobic004G099500 Sobic004G259700--Sobic001G416800 Sobic004G259700--Sobic003G127600 Sobic007G172300 Sobic007G172300 Sobic004G259700--Sobic007G172300 Sobic004G259700--Sobic003G057366 Sobic004G259700--Sobic007G168400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.