Gene annotation
Transcriptome id Sobic.004G300701.1
Synonym -
Functional annotation -
UniProt A0A1Z5RQ85
Pfam PF13855
Panther DB PTHR27000 PTHR27000:SF17
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G66330 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os02g43250.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a032160
Brachypodium KQK00544
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
2 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
4 Sobic.010G099400 metalloendoproteinase 1 precursor, putative, expressed -
5 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
6 Sobic.003G337100 expressed protein -
7 Sobic.010G013100 expressed protein -
8 Sobic.005G016600 DUF567 domain containing protein, putative, expressed -
9 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
10 Sobic.009G167300 CCT motif family protein, expressed -
11 Sobic.003G341200 expressed protein -
12 Sobic.009G244000 AMP-dependent synthetase("PubMedID : 26759170,PubMedID : 24597475")@AMP-binding enzyme, putative, expressed -
13 Sobic.009G116766 - -
14 Sobic.001G511200 expressed protein -
15 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G075801 - -
17 Sobic.001G216800 expressed protein -
18 Sobic.007G209100 expressed protein -
19 Sobic.001G038400 expressed protein -
20 Sobic.005G087600 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G300701 Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic001G430000 Sobic001G430000 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G342900 Sobic004G342900 Sobic004G300701--Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic005G016600 Sobic005G016600 Sobic004G300701--Sobic005G016600 Sobic003G201300 Sobic003G201300 Sobic004G300701--Sobic003G201300 Sobic002G326000 Sobic002G326000 Sobic003G283500--Sobic002G326000 Sobic003G283500--Sobic004G300701 Sobic004G025200 Sobic004G025200 Sobic003G283500--Sobic004G025200 Sobic003G283500--Sobic004G342900 Sobic009G165300 Sobic009G165300 Sobic003G283500--Sobic009G165300 Sobic003G283500--Sobic005G016600 Sobic002G420200 Sobic002G420200 Sobic003G283500--Sobic002G420200 Sobic006G134001 Sobic006G134001 Sobic003G283500--Sobic006G134001 Sobic010G158200 Sobic010G158200 Sobic003G283500--Sobic010G158200 Sobic007G224800--Sobic003G201300 Sobic008G078600 Sobic008G078600 Sobic007G224800--Sobic008G078600 Sobic009G116766 Sobic009G116766 Sobic007G224800--Sobic009G116766 Sobic007G224800--Sobic001G430000 Sobic010G036200 Sobic010G036200 Sobic007G224800--Sobic010G036200 Sobic005G087600 Sobic005G087600 Sobic007G224800--Sobic005G087600 Sobic001G361500 Sobic001G361500 Sobic007G224800--Sobic001G361500 Sobic009G164200 Sobic009G164200 Sobic007G224800--Sobic009G164200 Sobic003G026100 Sobic003G026100 Sobic007G224800--Sobic003G026100 Sobic001G430000--Sobic007G224800 Sobic002G359800 Sobic002G359800 Sobic001G430000--Sobic002G359800 Sobic001G430000--Sobic010G036200 Sobic002G184800 Sobic002G184800 Sobic001G430000--Sobic002G184800 Sobic003G184500 Sobic003G184500 Sobic001G430000--Sobic003G184500 Sobic008G037200 Sobic008G037200 Sobic001G430000--Sobic008G037200 Sobic001G430000--Sobic003G201300 Sobic003G023666 Sobic003G023666 Sobic001G430000--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic001G430000--Sobic008G127200 Sobic002G209300 Sobic002G209300 Sobic010G099400--Sobic002G209300 Sobic001G158000 Sobic001G158000 Sobic010G099400--Sobic001G158000 Sobic002G326050 Sobic002G326050 Sobic010G099400--Sobic002G326050 Sobic010G158100 Sobic010G158100 Sobic010G099400--Sobic010G158100 Sobic002G140100 Sobic002G140100 Sobic010G099400--Sobic002G140100 Sobic007G221800 Sobic007G221800 Sobic010G099400--Sobic007G221800 Sobic010G158766 Sobic010G158766 Sobic010G099400--Sobic010G158766 Sobic004G265400 Sobic004G265400 Sobic010G099400--Sobic004G265400 Sobic006G259201 Sobic006G259201 Sobic010G099400--Sobic006G259201 Sobic004G342900--Sobic003G337100 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic006G075801 Sobic006G075801 Sobic004G342900--Sobic006G075801 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic004G342900--Sobic003G283500 Sobic009G167300 Sobic009G167300 Sobic004G342900--Sobic009G167300 Sobic003G337100--Sobic009G167300 Sobic003G337100--Sobic004G342900 Sobic003G337100--Sobic002G326000 Sobic003G337100--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G337100--Sobic010G045200 Sobic003G337100--Sobic006G075801 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic003G300701 Sobic003G300701 Sobic010G013100--Sobic003G300701 Sobic001G416900 Sobic001G416900 Sobic010G013100--Sobic001G416900 Sobic001G417000 Sobic001G417000 Sobic010G013100--Sobic001G417000 Sobic009G167500 Sobic009G167500 Sobic010G013100--Sobic009G167500 Sobic007G168400 Sobic007G168400 Sobic010G013100--Sobic007G168400 Sobic001G009700 Sobic001G009700 Sobic010G013100--Sobic001G009700 Sobic001G216800 Sobic001G216800 Sobic010G013100--Sobic001G216800 Sobic010G013100--Sobic004G300701 Sobic004G259700 Sobic004G259700 Sobic010G013100--Sobic004G259700 Sobic005G016600--Sobic002G420200 Sobic005G016600--Sobic002G253000 Sobic010G256500 Sobic010G256500 Sobic005G016600--Sobic010G256500 Sobic005G016600--Sobic004G342900 Sobic005G016600--Sobic003G283500 Sobic005G016600--Sobic004G300701 Sobic005G139075 Sobic005G139075 Sobic005G016600--Sobic005G139075 Sobic002G350700 Sobic002G350700 Sobic005G016600--Sobic002G350700 Sobic002G318501 Sobic002G318501 Sobic005G016600--Sobic002G318501 Sobic003G201300--Sobic008G078600 Sobic003G201300--Sobic001G361500 Sobic003G201300--Sobic009G164200 Sobic003G201300--Sobic009G116766 Sobic003G201300--Sobic007G224800 Sobic003G201300--Sobic009G167300 Sobic006G209100 Sobic006G209100 Sobic003G201300--Sobic006G209100 Sobic003G201300--Sobic005G087600 Sobic003G201300--Sobic010G231400
Octagon: transcription factors


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