Gene annotation
Transcriptome id Sobic.005G016600.1
Synonym Sb05g001400
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt C5Y3K1
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41590 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os12g02760.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053772 , Zm00025a053778 , Zm00025a033327 , Zm00025a013169
Brachypodium KQJ92514
Barley HORVU5Hr1G046140.1 , HORVU5Hr1G046140.2 , HORVU5Hr1G046140.4 , HORVU5Hr1G046140.3
Wheat TraesCS5A02G144800 , TraesCS5D02G147500 , TraesCS5D02G147400 , TraesCS5B02G143700 , TraesCS5B02G143600 , TraesCS5A02G145000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G420200 proline-rich protein, putative, expressed -
2 Sobic.002G253000 no apical meristem protein, putative, expressed -
3 Sobic.010G256500 OsFBDUF35 - F-box and DUF domain containing protein, expressed -
4 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
5 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
6 Sobic.004G300701 - -
7 Sobic.005G139075 - -
8 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
9 Sobic.002G318501 - -
10 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G021900 cytochrome P450, putative, expressed K09832: sterol 22-desaturase
12 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.005G041200 OsFBX396 - F-box domain containing protein, expressed -
14 Sobic.003G043700 expressed protein -
15 Sobic.001G251300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
16 Sobic.002G314700 receptor-like protein kinase, putative, expressed -
17 Sobic.001G062600 aldehyde oxidase, putative, expressed -
18 Sobic.003G337100 expressed protein -
19 Sobic.006G249300 expressed protein -
20 Sobic.004G128000 expressed protein -


Gene co-expression network
sample Sobic005G016600 Sobic005G016600 Sobic002G420200 Sobic002G420200 Sobic005G016600--Sobic002G420200 Sobic002G253000 Sobic002G253000 Sobic005G016600--Sobic002G253000 Sobic010G256500 Sobic010G256500 Sobic005G016600--Sobic010G256500 Sobic004G342900 Sobic004G342900 Sobic005G016600--Sobic004G342900 Sobic003G283500 Sobic003G283500 Sobic005G016600--Sobic003G283500 Sobic004G300701 Sobic004G300701 Sobic005G016600--Sobic004G300701 Sobic005G139075 Sobic005G139075 Sobic005G016600--Sobic005G139075 Sobic002G350700 Sobic002G350700 Sobic005G016600--Sobic002G350700 Sobic002G318501 Sobic002G318501 Sobic005G016600--Sobic002G318501 Sobic009G165300 Sobic009G165300 Sobic002G420200--Sobic009G165300 Sobic006G134001 Sobic006G134001 Sobic002G420200--Sobic006G134001 Sobic010G260600 Sobic010G260600 Sobic002G420200--Sobic010G260600 Sobic004G025200 Sobic004G025200 Sobic002G420200--Sobic004G025200 Sobic002G420200--Sobic005G016600 Sobic001G038400 Sobic001G038400 Sobic002G420200--Sobic001G038400 Sobic003G043700 Sobic003G043700 Sobic002G420200--Sobic003G043700 Sobic003G121500 Sobic003G121500 Sobic002G420200--Sobic003G121500 Sobic003G152200 Sobic003G152200 Sobic002G420200--Sobic003G152200 Sobic002G253000--Sobic002G318501 Sobic010G057100 Sobic010G057100 Sobic002G253000--Sobic010G057100 Sobic009G015000 Sobic009G015000 Sobic002G253000--Sobic009G015000 Sobic002G253000--Sobic005G016600 Sobic002G314700 Sobic002G314700 Sobic002G253000--Sobic002G314700 Sobic002G253000--Sobic004G342900 Sobic004G099500 Sobic004G099500 Sobic002G253000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic002G253000--Sobic004G128000 Sobic001G062600 Sobic001G062600 Sobic002G253000--Sobic001G062600 Sobic010G256500--Sobic005G016600 Sobic003G085800 Sobic003G085800 Sobic010G256500--Sobic003G085800 Sobic001G251300 Sobic001G251300 Sobic010G256500--Sobic001G251300 Sobic010G256500--Sobic004G342900 Sobic010G256500--Sobic004G300701 Sobic009G244000 Sobic009G244000 Sobic010G256500--Sobic009G244000 Sobic003G337100 Sobic003G337100 Sobic010G256500--Sobic003G337100 Sobic006G149400 Sobic006G149400 Sobic010G256500--Sobic006G149400 Sobic010G256500--Sobic005G139075 Sobic004G342900--Sobic003G337100 Sobic002G326000 Sobic002G326000 Sobic004G342900--Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic004G342900--Sobic010G158200 Sobic004G342900--Sobic002G253000 Sobic006G075801 Sobic006G075801 Sobic004G342900--Sobic006G075801 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic004G342900--Sobic003G283500 Sobic009G167300 Sobic009G167300 Sobic004G342900--Sobic009G167300 Sobic003G283500--Sobic002G326000 Sobic003G283500--Sobic004G300701 Sobic003G283500--Sobic004G025200 Sobic003G283500--Sobic004G342900 Sobic003G283500--Sobic009G165300 Sobic003G283500--Sobic005G016600 Sobic003G283500--Sobic002G420200 Sobic003G283500--Sobic006G134001 Sobic003G283500--Sobic010G158200 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic001G430000 Sobic001G430000 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G300701--Sobic004G342900 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic004G300701--Sobic005G016600 Sobic003G201300 Sobic003G201300 Sobic004G300701--Sobic003G201300 Sobic005G139075--Sobic002G314700 Sobic009G198600 Sobic009G198600 Sobic005G139075--Sobic009G198600 Sobic001G112200 Sobic001G112200 Sobic005G139075--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic005G139075--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic005G139075--Sobic009G145700 Sobic003G362700 Sobic003G362700 Sobic005G139075--Sobic003G362700 Sobic001G502400 Sobic001G502400 Sobic005G139075--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic005G139075--Sobic006G235100 Sobic008G139600 Sobic008G139600 Sobic005G139075--Sobic008G139600 Sobic001G161601 Sobic001G161601 Sobic002G350700--Sobic001G161601 Sobic001G059700 Sobic001G059700 Sobic002G350700--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic002G350700--Sobic010G085800 Sobic001G112100 Sobic001G112100 Sobic002G350700--Sobic001G112100 Sobic009G232100 Sobic009G232100 Sobic002G350700--Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic002G350700--Sobic009G088900 Sobic001G159900 Sobic001G159900 Sobic002G350700--Sobic001G159900 Sobic004G055100 Sobic004G055100 Sobic002G350700--Sobic004G055100 Sobic001G264700 Sobic001G264700 Sobic002G350700--Sobic001G264700 Sobic002G318501--Sobic002G253000 Sobic001G425300 Sobic001G425300 Sobic002G318501--Sobic001G425300 Sobic002G318501--Sobic002G314700 Sobic001G313200 Sobic001G313200 Sobic002G318501--Sobic001G313200 Sobic002G318501--Sobic005G139075 Sobic005G029200 Sobic005G029200 Sobic002G318501--Sobic005G029200 Sobic003G322532 Sobic003G322532 Sobic002G318501--Sobic003G322532 Sobic004G189400 Sobic004G189400 Sobic002G318501--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic002G318501--Sobic006G099900
Octagon: transcription factors


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