Gene annotation
Transcriptome id Sobic.002G318501.1
Synonym -
Functional annotation -
UniProt A0A1W0W6H3
Pfam -
Panther DB PTHR35687 PTHR35687:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04745 : -
RAP-DB (Rice) LOC_Os07g33320.1 : expressed protein
MaizeGDB (Corn) Zm00025a048221 , Zm00025a014793
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G253000 no apical meristem protein, putative, expressed -
2 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G314700 receptor-like protein kinase, putative, expressed -
4 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
5 Sobic.005G139075 - -
6 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
7 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
8 Sobic.004G189400 expressed protein -
9 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
12 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
13 Sobic.001G402200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed -
14 Sobic.004G203700 ubiquitin family protein, putative, expressed -
15 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
19 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase


Gene co-expression network
sample Sobic002G318501 Sobic002G318501 Sobic002G253000 Sobic002G253000 Sobic002G318501--Sobic002G253000 Sobic001G425300 Sobic001G425300 Sobic002G318501--Sobic001G425300 Sobic002G314700 Sobic002G314700 Sobic002G318501--Sobic002G314700 Sobic001G313200 Sobic001G313200 Sobic002G318501--Sobic001G313200 Sobic005G139075 Sobic005G139075 Sobic002G318501--Sobic005G139075 Sobic005G029200 Sobic005G029200 Sobic002G318501--Sobic005G029200 Sobic003G322532 Sobic003G322532 Sobic002G318501--Sobic003G322532 Sobic004G189400 Sobic004G189400 Sobic002G318501--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic002G318501--Sobic006G099900 Sobic002G253000--Sobic002G318501 Sobic010G057100 Sobic010G057100 Sobic002G253000--Sobic010G057100 Sobic009G015000 Sobic009G015000 Sobic002G253000--Sobic009G015000 Sobic005G016600 Sobic005G016600 Sobic002G253000--Sobic005G016600 Sobic002G253000--Sobic002G314700 Sobic004G342900 Sobic004G342900 Sobic002G253000--Sobic004G342900 Sobic004G099500 Sobic004G099500 Sobic002G253000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic002G253000--Sobic004G128000 Sobic001G062600 Sobic001G062600 Sobic002G253000--Sobic001G062600 Sobic001G425300--Sobic002G318501 Sobic001G425300--Sobic005G139075 Sobic001G425300--Sobic003G322532 Sobic001G112100 Sobic001G112100 Sobic001G425300--Sobic001G112100 Sobic001G351000 Sobic001G351000 Sobic001G425300--Sobic001G351000 Sobic001G459800 Sobic001G459800 Sobic001G425300--Sobic001G459800 Sobic005G011300 Sobic005G011300 Sobic001G425300--Sobic005G011300 Sobic001G425300--Sobic002G314700 Sobic003G432700 Sobic003G432700 Sobic001G425300--Sobic003G432700 Sobic002G055700 Sobic002G055700 Sobic002G314700--Sobic002G055700 Sobic002G314700--Sobic005G029200 Sobic001G112200 Sobic001G112200 Sobic002G314700--Sobic001G112200 Sobic003G303100 Sobic003G303100 Sobic002G314700--Sobic003G303100 Sobic002G314700--Sobic005G139075 Sobic008G050600 Sobic008G050600 Sobic002G314700--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic002G314700--Sobic001G140900 Sobic002G314700--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic002G314700--Sobic003G382600 Sobic001G529400 Sobic001G529400 Sobic001G313200--Sobic001G529400 Sobic010G047100 Sobic010G047100 Sobic001G313200--Sobic010G047100 Sobic004G203700 Sobic004G203700 Sobic001G313200--Sobic004G203700 Sobic004G041900 Sobic004G041900 Sobic001G313200--Sobic004G041900 Sobic009G145500 Sobic009G145500 Sobic001G313200--Sobic009G145500 Sobic003G125650 Sobic003G125650 Sobic001G313200--Sobic003G125650 Sobic003G078200 Sobic003G078200 Sobic001G313200--Sobic003G078200 Sobic004G271400 Sobic004G271400 Sobic001G313200--Sobic004G271400 Sobic006G191800 Sobic006G191800 Sobic001G313200--Sobic006G191800 Sobic005G139075--Sobic002G314700 Sobic009G198600 Sobic009G198600 Sobic005G139075--Sobic009G198600 Sobic005G139075--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic005G139075--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic005G139075--Sobic009G145700 Sobic003G362700 Sobic003G362700 Sobic005G139075--Sobic003G362700 Sobic001G502400 Sobic001G502400 Sobic005G139075--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic005G139075--Sobic006G235100 Sobic008G139600 Sobic008G139600 Sobic005G139075--Sobic008G139600 Sobic005G029200--Sobic004G189400 Sobic004G148200 Sobic004G148200 Sobic005G029200--Sobic004G148200 Sobic003G297600 Sobic003G297600 Sobic005G029200--Sobic003G297600 Sobic010G213700 Sobic010G213700 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic009G077800 Sobic009G077800 Sobic005G029200--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic005G029200--Sobic009G139400 Sobic001G423800 Sobic001G423800 Sobic005G029200--Sobic001G423800 Sobic002G414700 Sobic002G414700 Sobic003G322532--Sobic002G414700 Sobic001G295200 Sobic001G295200 Sobic003G322532--Sobic001G295200 Sobic007G211700 Sobic007G211700 Sobic003G322532--Sobic007G211700 Sobic005G107900 Sobic005G107900 Sobic003G322532--Sobic005G107900 Sobic001G367600 Sobic001G367600 Sobic003G322532--Sobic001G367600 Sobic003G152600 Sobic003G152600 Sobic003G322532--Sobic003G152600 Sobic003G043600 Sobic003G043600 Sobic003G322532--Sobic003G043600 Sobic009G111000 Sobic009G111000 Sobic003G322532--Sobic009G111000 Sobic001G493001 Sobic001G493001 Sobic003G322532--Sobic001G493001 Sobic002G140400 Sobic002G140400 Sobic004G189400--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G189400--Sobic005G091500 Sobic002G263400 Sobic002G263400 Sobic004G189400--Sobic002G263400 Sobic004G189400--Sobic008G050600 Sobic004G237800 Sobic004G237800 Sobic004G189400--Sobic004G237800 Sobic004G189400--Sobic003G382600 Sobic004G189400--Sobic006G099900 Sobic008G136400 Sobic008G136400 Sobic004G189400--Sobic008G136400 Sobic004G189400--Sobic005G029200 Sobic007G227300 Sobic007G227300 Sobic006G099900--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic006G099900--Sobic003G252800 Sobic001G317200 Sobic001G317200 Sobic006G099900--Sobic001G317200 Sobic003G286600 Sobic003G286600 Sobic006G099900--Sobic003G286600 Sobic010G084400 Sobic010G084400 Sobic006G099900--Sobic010G084400 Sobic006G099900--Sobic004G189400 Sobic006G099900--Sobic008G050600 Sobic006G099900--Sobic005G091500 Sobic006G277600 Sobic006G277600 Sobic006G099900--Sobic006G277600
Octagon: transcription factors


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