Gene annotation
Transcriptome id Sobic.005G139075.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIJ4
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28190 : -
RAP-DB (Rice) LOC_Os11g33050.1 : expressed protein
MaizeGDB (Corn) Zm00025a033572 , Zm00025a015706
Brachypodium KQJ88327
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G314700 receptor-like protein kinase, putative, expressed -
2 Sobic.009G198600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
5 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G362700 cytochrome P450, putative, expressed -
7 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
8 Sobic.006G235100 expressed protein -
9 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
10 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
11 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.008G066401 - -
13 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
14 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
15 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
16 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
20 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -


Gene co-expression network
sample Sobic005G139075 Sobic005G139075 Sobic002G314700 Sobic002G314700 Sobic005G139075--Sobic002G314700 Sobic009G198600 Sobic009G198600 Sobic005G139075--Sobic009G198600 Sobic001G112200 Sobic001G112200 Sobic005G139075--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic005G139075--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic005G139075--Sobic009G145700 Sobic003G362700 Sobic003G362700 Sobic005G139075--Sobic003G362700 Sobic001G502400 Sobic001G502400 Sobic005G139075--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic005G139075--Sobic006G235100 Sobic008G139600 Sobic008G139600 Sobic005G139075--Sobic008G139600 Sobic002G055700 Sobic002G055700 Sobic002G314700--Sobic002G055700 Sobic005G029200 Sobic005G029200 Sobic002G314700--Sobic005G029200 Sobic002G314700--Sobic001G112200 Sobic003G303100 Sobic003G303100 Sobic002G314700--Sobic003G303100 Sobic002G314700--Sobic005G139075 Sobic008G050600 Sobic008G050600 Sobic002G314700--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic002G314700--Sobic001G140900 Sobic004G189400 Sobic004G189400 Sobic002G314700--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic002G314700--Sobic003G382600 Sobic001G259900 Sobic001G259900 Sobic009G198600--Sobic001G259900 Sobic003G442100 Sobic003G442100 Sobic009G198600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic009G198600--Sobic001G310600 Sobic008G044300 Sobic008G044300 Sobic009G198600--Sobic008G044300 Sobic005G186100 Sobic005G186100 Sobic009G198600--Sobic005G186100 Sobic009G198600--Sobic009G184000 Sobic009G198600--Sobic001G502400 Sobic009G198600--Sobic006G235100 Sobic009G198600--Sobic005G139075 Sobic001G112200--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic001G112200--Sobic001G318700 Sobic001G138600 Sobic001G138600 Sobic001G112200--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic001G112200--Sobic003G369100 Sobic007G169700 Sobic007G169700 Sobic001G112200--Sobic007G169700 Sobic004G237800 Sobic004G237800 Sobic001G112200--Sobic004G237800 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G112200--Sobic001G310600 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic009G184000--Sobic003G228900 Sobic003G432700 Sobic003G432700 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic009G145600 Sobic009G145600 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic008G066200 Sobic008G066200 Sobic009G145700--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic003G043600 Sobic003G043600 Sobic009G145700--Sobic003G043600 Sobic003G043500 Sobic003G043500 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic003G079200 Sobic003G079200 Sobic009G145700--Sobic003G079200 Sobic003G362700--Sobic008G066401 Sobic003G362700--Sobic009G184000 Sobic003G362700--Sobic002G189100 Sobic003G362700--Sobic001G112200 Sobic010G209200 Sobic010G209200 Sobic003G362700--Sobic010G209200 Sobic003G362700--Sobic007G169700 Sobic003G362700--Sobic001G138600 Sobic003G362700--Sobic009G145700 Sobic003G142300 Sobic003G142300 Sobic003G362700--Sobic003G142300 Sobic005G107900 Sobic005G107900 Sobic001G502400--Sobic005G107900 Sobic001G313600 Sobic001G313600 Sobic001G502400--Sobic001G313600 Sobic001G502400--Sobic006G235100 Sobic001G502400--Sobic003G432700 Sobic001G502400--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic001G502400--Sobic006G075400 Sobic009G188000 Sobic009G188000 Sobic001G502400--Sobic009G188000 Sobic005G011300 Sobic005G011300 Sobic001G502400--Sobic005G011300 Sobic006G007900 Sobic006G007900 Sobic001G502400--Sobic006G007900 Sobic006G235100--Sobic001G502400 Sobic006G235100--Sobic006G007900 Sobic006G235100--Sobic001G313600 Sobic006G235100--Sobic009G184000 Sobic006G235100--Sobic005G107900 Sobic006G235100--Sobic003G442100 Sobic004G141100 Sobic004G141100 Sobic006G235100--Sobic004G141100 Sobic006G235100--Sobic006G075400 Sobic006G235100--Sobic003G432700 Sobic006G054800 Sobic006G054800 Sobic008G139600--Sobic006G054800 Sobic004G321300 Sobic004G321300 Sobic008G139600--Sobic004G321300 Sobic008G139600--Sobic001G112200 Sobic008G139600--Sobic004G237800 Sobic008G139600--Sobic009G145700 Sobic008G139600--Sobic002G055700 Sobic008G139600--Sobic009G184000 Sobic008G139600--Sobic003G043500 Sobic008G139600--Sobic009G145600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.