Gene annotation
Transcriptome id Sobic.001G425300.1
Synonym Sb01g039970
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WQ37
Pfam PF04788
Panther DB PTHR31300 PTHR31300:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05840 : Protein of unknown function (DUF620)
RAP-DB (Rice) LOC_Os03g16060.1 : expressed protein
MaizeGDB (Corn) Zm00025a039959 , Zm00025a052214 , Zm00025a001765 , Zm00025a052787
Brachypodium KQK22407 , KQK06958
Barley HORVU4Hr1G060590.6 , HORVU4Hr1G060590.7 , HORVU4Hr1G060590.4 , HORVU4Hr1G060590.5 , HORVU4Hr1G060590.2 , HORVU4Hr1G060590.3 , HORVU4Hr1G060590.1 , HORVU4Hr1G060590.8 , HORVU4Hr1G060590.9
Wheat TraesCS4A02G093200 , TraesCS4B02G211300 , TraesCS4D02G211900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G318501 - -
2 Sobic.005G139075 - -
3 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
4 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.001G351000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
6 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
7 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.002G314700 receptor-like protein kinase, putative, expressed -
9 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
10 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
11 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
12 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
13 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
14 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
15 Sobic.001G169500 - -
16 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
18 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
19 Sobic.003G362700 cytochrome P450, putative, expressed -
20 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic001G425300 Sobic001G425300 Sobic002G318501 Sobic002G318501 Sobic001G425300--Sobic002G318501 Sobic005G139075 Sobic005G139075 Sobic001G425300--Sobic005G139075 Sobic003G322532 Sobic003G322532 Sobic001G425300--Sobic003G322532 Sobic001G112100 Sobic001G112100 Sobic001G425300--Sobic001G112100 Sobic001G351000 Sobic001G351000 Sobic001G425300--Sobic001G351000 Sobic001G459800 Sobic001G459800 Sobic001G425300--Sobic001G459800 Sobic005G011300 Sobic005G011300 Sobic001G425300--Sobic005G011300 Sobic002G314700 Sobic002G314700 Sobic001G425300--Sobic002G314700 Sobic003G432700 Sobic003G432700 Sobic001G425300--Sobic003G432700 Sobic002G253000 Sobic002G253000 Sobic002G318501--Sobic002G253000 Sobic002G318501--Sobic001G425300 Sobic002G318501--Sobic002G314700 Sobic001G313200 Sobic001G313200 Sobic002G318501--Sobic001G313200 Sobic002G318501--Sobic005G139075 Sobic005G029200 Sobic005G029200 Sobic002G318501--Sobic005G029200 Sobic002G318501--Sobic003G322532 Sobic004G189400 Sobic004G189400 Sobic002G318501--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic002G318501--Sobic006G099900 Sobic005G139075--Sobic002G314700 Sobic009G198600 Sobic009G198600 Sobic005G139075--Sobic009G198600 Sobic001G112200 Sobic001G112200 Sobic005G139075--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic005G139075--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic005G139075--Sobic009G145700 Sobic003G362700 Sobic003G362700 Sobic005G139075--Sobic003G362700 Sobic001G502400 Sobic001G502400 Sobic005G139075--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic005G139075--Sobic006G235100 Sobic008G139600 Sobic008G139600 Sobic005G139075--Sobic008G139600 Sobic002G414700 Sobic002G414700 Sobic003G322532--Sobic002G414700 Sobic001G295200 Sobic001G295200 Sobic003G322532--Sobic001G295200 Sobic007G211700 Sobic007G211700 Sobic003G322532--Sobic007G211700 Sobic005G107900 Sobic005G107900 Sobic003G322532--Sobic005G107900 Sobic001G367600 Sobic001G367600 Sobic003G322532--Sobic001G367600 Sobic003G152600 Sobic003G152600 Sobic003G322532--Sobic003G152600 Sobic003G043600 Sobic003G043600 Sobic003G322532--Sobic003G043600 Sobic009G111000 Sobic009G111000 Sobic003G322532--Sobic009G111000 Sobic001G493001 Sobic001G493001 Sobic003G322532--Sobic001G493001 Sobic009G188000 Sobic009G188000 Sobic001G112100--Sobic009G188000 Sobic004G295100 Sobic004G295100 Sobic001G112100--Sobic004G295100 Sobic001G304100 Sobic001G304100 Sobic001G112100--Sobic001G304100 Sobic008G009400 Sobic008G009400 Sobic001G112100--Sobic008G009400 Sobic006G172550 Sobic006G172550 Sobic001G112100--Sobic006G172550 Sobic004G297900 Sobic004G297900 Sobic001G112100--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic001G112100--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G112100--Sobic004G292900 Sobic006G235200 Sobic006G235200 Sobic001G112100--Sobic006G235200 Sobic004G065500 Sobic004G065500 Sobic001G351000--Sobic004G065500 Sobic004G220000 Sobic004G220000 Sobic001G351000--Sobic004G220000 Sobic004G171400 Sobic004G171400 Sobic001G351000--Sobic004G171400 Sobic001G351000--Sobic001G459800 Sobic006G267200 Sobic006G267200 Sobic001G351000--Sobic006G267200 Sobic009G141800 Sobic009G141800 Sobic001G351000--Sobic009G141800 Sobic003G393900 Sobic003G393900 Sobic001G351000--Sobic003G393900 Sobic005G113300 Sobic005G113300 Sobic001G351000--Sobic005G113300 Sobic003G228900 Sobic003G228900 Sobic001G351000--Sobic003G228900 Sobic001G391500 Sobic001G391500 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic004G141200 Sobic004G141200 Sobic001G459800--Sobic004G141200 Sobic001G459800--Sobic003G393900 Sobic001G459800--Sobic003G228900 Sobic001G459800--Sobic004G065500 Sobic001G138600 Sobic001G138600 Sobic001G459800--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G459800--Sobic007G074000 Sobic001G459800--Sobic005G011300 Sobic004G100700 Sobic004G100700 Sobic005G011300--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic005G011300--Sobic001G169500 Sobic002G188900 Sobic002G188900 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic005G011300--Sobic004G171400 Sobic002G055700 Sobic002G055700 Sobic002G314700--Sobic002G055700 Sobic002G314700--Sobic005G029200 Sobic002G314700--Sobic001G112200 Sobic003G303100 Sobic003G303100 Sobic002G314700--Sobic003G303100 Sobic002G314700--Sobic005G139075 Sobic008G050600 Sobic008G050600 Sobic002G314700--Sobic008G050600 Sobic002G314700--Sobic001G140900 Sobic002G314700--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic002G314700--Sobic003G382600 Sobic003G432700--Sobic005G107900 Sobic003G432700--Sobic001G502400 Sobic003G432700--Sobic003G228900 Sobic003G432700--Sobic005G011300 Sobic001G313600 Sobic001G313600 Sobic003G432700--Sobic001G313600 Sobic003G432700--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic003G432700--Sobic006G075400 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700
Octagon: transcription factors


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