Gene annotation
Transcriptome id Sobic.004G342900.1
Synonym
Functional annotation RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt C5XV99
Pfam -
Panther DB PTHR34998
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g31550.1 : RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G337100 expressed protein -
2 Sobic.002G326000 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
3 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G253000 no apical meristem protein, putative, expressed -
5 Sobic.006G075801 - -
6 Sobic.005G016600 DUF567 domain containing protein, putative, expressed -
7 Sobic.004G300701 - -
8 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
9 Sobic.009G167300 CCT motif family protein, expressed -
10 Sobic.002G171600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
11 Sobic.002G318501 - -
12 Sobic.007G169000 similar to Putative uncharacterized protein P0562A06.5(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.003G341200 expressed protein -
14 Sobic.004G128000 expressed protein -
15 Sobic.003G347200 expressed protein -
16 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
17 Sobic.010G256500 OsFBDUF35 - F-box and DUF domain containing protein, expressed -
18 Sobic.003G213600 expressed protein -
19 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
20 Sobic.010G099400 metalloendoproteinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G342900 Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic004G342900--Sobic003G337100 Sobic002G326000 Sobic002G326000 Sobic004G342900--Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic006G075801 Sobic006G075801 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G300701 Sobic004G300701 Sobic004G342900--Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G342900--Sobic003G283500 Sobic009G167300 Sobic009G167300 Sobic004G342900--Sobic009G167300 Sobic003G337100--Sobic009G167300 Sobic003G337100--Sobic004G342900 Sobic003G337100--Sobic002G326000 Sobic003G337100--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G337100--Sobic010G045200 Sobic003G337100--Sobic006G075801 Sobic003G201300 Sobic003G201300 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic002G326000--Sobic010G158200 Sobic002G326000--Sobic004G342900 Sobic002G326000--Sobic003G337100 Sobic002G326000--Sobic006G075801 Sobic002G326000--Sobic009G167300 Sobic002G326000--Sobic003G283500 Sobic002G326000--Sobic002G253000 Sobic002G326000--Sobic010G045200 Sobic001G388900 Sobic001G388900 Sobic002G326000--Sobic001G388900 Sobic010G158200--Sobic006G075801 Sobic010G158200--Sobic002G326000 Sobic010G158200--Sobic003G337100 Sobic010G158200--Sobic004G342900 Sobic010G125400 Sobic010G125400 Sobic010G158200--Sobic010G125400 Sobic010G158200--Sobic002G253000 Sobic002G171600 Sobic002G171600 Sobic010G158200--Sobic002G171600 Sobic002G318501 Sobic002G318501 Sobic010G158200--Sobic002G318501 Sobic010G158200--Sobic009G167300 Sobic002G253000--Sobic002G318501 Sobic010G057100 Sobic010G057100 Sobic002G253000--Sobic010G057100 Sobic009G015000 Sobic009G015000 Sobic002G253000--Sobic009G015000 Sobic002G253000--Sobic005G016600 Sobic002G314700 Sobic002G314700 Sobic002G253000--Sobic002G314700 Sobic002G253000--Sobic004G342900 Sobic004G099500 Sobic004G099500 Sobic002G253000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic002G253000--Sobic004G128000 Sobic001G062600 Sobic001G062600 Sobic002G253000--Sobic001G062600 Sobic006G075801--Sobic010G158200 Sobic006G075801--Sobic002G326000 Sobic006G075801--Sobic003G337100 Sobic006G075801--Sobic006G239100 Sobic006G075801--Sobic009G167300 Sobic006G075801--Sobic004G342900 Sobic005G231201 Sobic005G231201 Sobic006G075801--Sobic005G231201 Sobic006G075801--Sobic010G045200 Sobic003G022800 Sobic003G022800 Sobic006G075801--Sobic003G022800 Sobic002G420200 Sobic002G420200 Sobic005G016600--Sobic002G420200 Sobic005G016600--Sobic002G253000 Sobic010G256500 Sobic010G256500 Sobic005G016600--Sobic010G256500 Sobic005G016600--Sobic004G342900 Sobic005G016600--Sobic003G283500 Sobic005G016600--Sobic004G300701 Sobic005G139075 Sobic005G139075 Sobic005G016600--Sobic005G139075 Sobic002G350700 Sobic002G350700 Sobic005G016600--Sobic002G350700 Sobic005G016600--Sobic002G318501 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic001G430000 Sobic001G430000 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G300701--Sobic004G342900 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic004G300701--Sobic005G016600 Sobic004G300701--Sobic003G201300 Sobic003G283500--Sobic002G326000 Sobic003G283500--Sobic004G300701 Sobic004G025200 Sobic004G025200 Sobic003G283500--Sobic004G025200 Sobic003G283500--Sobic004G342900 Sobic009G165300 Sobic009G165300 Sobic003G283500--Sobic009G165300 Sobic003G283500--Sobic005G016600 Sobic003G283500--Sobic002G420200 Sobic006G134001 Sobic006G134001 Sobic003G283500--Sobic006G134001 Sobic003G283500--Sobic010G158200 Sobic006G209100 Sobic006G209100 Sobic009G167300--Sobic006G209100 Sobic009G167300--Sobic003G201300 Sobic009G167300--Sobic010G231400 Sobic006G201200 Sobic006G201200 Sobic009G167300--Sobic006G201200 Sobic009G164200 Sobic009G164200 Sobic009G167300--Sobic009G164200 Sobic001G361500 Sobic001G361500 Sobic009G167300--Sobic001G361500 Sobic006G185400 Sobic006G185400 Sobic009G167300--Sobic006G185400 Sobic001G172900 Sobic001G172900 Sobic009G167300--Sobic001G172900 Sobic004G330500 Sobic004G330500 Sobic009G167300--Sobic004G330500
Octagon: transcription factors


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