Gene annotation
Transcriptome id Sobic.002G171600.1
Synonym Sb02g022080
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
UniProt C5X9U6 , H0I4C5
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF403
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology K00059; fabG, 3-oxoacyl-[acyl-carrier protein] reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03980 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g53690.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046497
Brachypodium -
Barley HORVU5Hr1G094940.2 , HORVU5Hr1G094940.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G171600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G169000 similar to Putative uncharacterized protein P0562A06.5(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.007G209100 expressed protein -
3 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
5 Sobic.003G337100 expressed protein -
6 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G326000 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
8 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
9 Sobic.006G075801 - -
10 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
11 Sobic.009G167300 CCT motif family protein, expressed -
12 Sobic.001G216800 expressed protein -
13 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
14 Sobic.009G064100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G213600 expressed protein -
16 Sobic.010G125400 chaperone protein dnaJ, putative, expressed -
17 Sobic.004G025200 expressed protein -
18 Sobic.010G030100 homeobox associated leucine zipper, putative, expressed -
19 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
20 Sobic.005G004800 PMR5, putative, expressed -


Gene co-expression network
sample Sobic002G171600 Sobic002G171600 Sobic007G169000 Sobic007G169000 Sobic002G171600--Sobic007G169000 Sobic007G209100 Sobic007G209100 Sobic002G171600--Sobic007G209100 Sobic010G158200 Sobic010G158200 Sobic002G171600--Sobic010G158200 Sobic004G342900 Sobic004G342900 Sobic002G171600--Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic002G171600--Sobic003G337100 Sobic004G296100 Sobic004G296100 Sobic002G171600--Sobic004G296100 Sobic002G326000 Sobic002G326000 Sobic002G171600--Sobic002G326000 Sobic003G022800 Sobic003G022800 Sobic002G171600--Sobic003G022800 Sobic006G075801 Sobic006G075801 Sobic002G171600--Sobic006G075801 Sobic007G169000--Sobic003G022800 Sobic007G169000--Sobic002G171600 Sobic007G169000--Sobic007G209100 Sobic007G169000--Sobic004G342900 Sobic007G169000--Sobic004G296100 Sobic009G178900 Sobic009G178900 Sobic007G169000--Sobic009G178900 Sobic007G169000--Sobic003G337100 Sobic003G364700 Sobic003G364700 Sobic007G169000--Sobic003G364700 Sobic003G047300 Sobic003G047300 Sobic007G169000--Sobic003G047300 Sobic007G209100--Sobic002G171600 Sobic007G209100--Sobic007G169000 Sobic004G300701 Sobic004G300701 Sobic007G209100--Sobic004G300701 Sobic007G168400 Sobic007G168400 Sobic007G209100--Sobic007G168400 Sobic007G209100--Sobic009G178900 Sobic001G511200 Sobic001G511200 Sobic007G209100--Sobic001G511200 Sobic007G209100--Sobic004G296100 Sobic007G209100--Sobic003G364700 Sobic004G049800 Sobic004G049800 Sobic007G209100--Sobic004G049800 Sobic010G158200--Sobic006G075801 Sobic010G158200--Sobic002G326000 Sobic010G158200--Sobic003G337100 Sobic010G158200--Sobic004G342900 Sobic010G125400 Sobic010G125400 Sobic010G158200--Sobic010G125400 Sobic002G253000 Sobic002G253000 Sobic010G158200--Sobic002G253000 Sobic010G158200--Sobic002G171600 Sobic002G318501 Sobic002G318501 Sobic010G158200--Sobic002G318501 Sobic009G167300 Sobic009G167300 Sobic010G158200--Sobic009G167300 Sobic004G342900--Sobic003G337100 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic004G342900--Sobic002G253000 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G342900--Sobic003G283500 Sobic004G342900--Sobic009G167300 Sobic003G337100--Sobic009G167300 Sobic003G337100--Sobic004G342900 Sobic003G337100--Sobic002G326000 Sobic003G337100--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G337100--Sobic010G045200 Sobic003G337100--Sobic006G075801 Sobic003G201300 Sobic003G201300 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic004G296100--Sobic004G049800 Sobic004G296100--Sobic003G047300 Sobic009G070000 Sobic009G070000 Sobic004G296100--Sobic009G070000 Sobic006G271100 Sobic006G271100 Sobic004G296100--Sobic006G271100 Sobic005G111600 Sobic005G111600 Sobic004G296100--Sobic005G111600 Sobic002G025300 Sobic002G025300 Sobic004G296100--Sobic002G025300 Sobic002G206400 Sobic002G206400 Sobic004G296100--Sobic002G206400 Sobic008G144300 Sobic008G144300 Sobic004G296100--Sobic008G144300 Sobic004G296100--Sobic007G169000 Sobic002G326000--Sobic010G158200 Sobic002G326000--Sobic004G342900 Sobic002G326000--Sobic003G337100 Sobic002G326000--Sobic006G075801 Sobic002G326000--Sobic009G167300 Sobic002G326000--Sobic003G283500 Sobic002G326000--Sobic002G253000 Sobic002G326000--Sobic010G045200 Sobic001G388900 Sobic001G388900 Sobic002G326000--Sobic001G388900 Sobic003G022800--Sobic007G169000 Sobic003G022800--Sobic010G045200 Sobic004G356600 Sobic004G356600 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic008G086401 Sobic008G086401 Sobic003G022800--Sobic008G086401 Sobic003G022800--Sobic009G167300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic005G087600 Sobic005G087600 Sobic003G022800--Sobic005G087600 Sobic006G075801--Sobic010G158200 Sobic006G075801--Sobic002G326000 Sobic006G075801--Sobic003G337100 Sobic006G075801--Sobic006G239100 Sobic006G075801--Sobic009G167300 Sobic006G075801--Sobic004G342900 Sobic005G231201 Sobic005G231201 Sobic006G075801--Sobic005G231201 Sobic006G075801--Sobic010G045200 Sobic006G075801--Sobic003G022800
Octagon: transcription factors


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