Gene annotation
Transcriptome id Sobic.002G326000.1
Synonym Sb02g035310
Functional annotation aspartic proteinase nepenthesin-1 precursor, putative, expressed
UniProt C5XAQ6
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF324
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G03200 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os07g34940.1 : aspartic proteinase nepenthesin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014039 , Zm00025a014038 , Zm00025a048273 , Zm00025a014835 , Zm00025a014836 , Zm00025a030627
Brachypodium KQK15916 , KQJ86115 , KQJ90483 , KQJ90482
Barley HORVU5Hr1G067660.1 , HORVU2Hr1G045020.1 , HORVU2Hr1G044940.1 , HORVU5Hr1G067700.1 , HORVU5Hr1G108750.1 , HORVU5Hr1G108750.2 , HORVU5Hr1G108750.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
3 Sobic.003G337100 expressed protein -
4 Sobic.006G075801 - -
5 Sobic.009G167300 CCT motif family protein, expressed -
6 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
7 Sobic.002G253000 no apical meristem protein, putative, expressed -
8 Sobic.010G045200 expressed protein -
9 Sobic.001G388900 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase
10 Sobic.005G231201 - -
11 Sobic.003G213600 expressed protein -
12 Sobic.006G239100 VQ domain containing protein, putative, expressed -
13 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
14 Sobic.001G251300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
15 Sobic.004G300701 - -
16 Sobic.010G125400 chaperone protein dnaJ, putative, expressed -
17 Sobic.002G318501 - -
18 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.009G244000 AMP-dependent synthetase("PubMedID : 26759170,PubMedID : 24597475")@AMP-binding enzyme, putative, expressed -
20 Sobic.002G064700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein 1-deoxy-D-xylulose-5-phosphate synthase (Os)(PubMedID : 27208977)@transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase


Gene co-expression network
sample Sobic002G326000 Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic002G326000--Sobic010G158200 Sobic004G342900 Sobic004G342900 Sobic002G326000--Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic002G326000--Sobic003G337100 Sobic006G075801 Sobic006G075801 Sobic002G326000--Sobic006G075801 Sobic009G167300 Sobic009G167300 Sobic002G326000--Sobic009G167300 Sobic003G283500 Sobic003G283500 Sobic002G326000--Sobic003G283500 Sobic002G253000 Sobic002G253000 Sobic002G326000--Sobic002G253000 Sobic010G045200 Sobic010G045200 Sobic002G326000--Sobic010G045200 Sobic001G388900 Sobic001G388900 Sobic002G326000--Sobic001G388900 Sobic010G158200--Sobic006G075801 Sobic010G158200--Sobic002G326000 Sobic010G158200--Sobic003G337100 Sobic010G158200--Sobic004G342900 Sobic010G125400 Sobic010G125400 Sobic010G158200--Sobic010G125400 Sobic010G158200--Sobic002G253000 Sobic002G171600 Sobic002G171600 Sobic010G158200--Sobic002G171600 Sobic002G318501 Sobic002G318501 Sobic010G158200--Sobic002G318501 Sobic010G158200--Sobic009G167300 Sobic004G342900--Sobic003G337100 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic004G342900--Sobic002G253000 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G300701 Sobic004G300701 Sobic004G342900--Sobic004G300701 Sobic004G342900--Sobic003G283500 Sobic004G342900--Sobic009G167300 Sobic003G337100--Sobic009G167300 Sobic003G337100--Sobic004G342900 Sobic003G337100--Sobic002G326000 Sobic003G337100--Sobic010G158200 Sobic003G337100--Sobic010G045200 Sobic003G337100--Sobic006G075801 Sobic003G201300 Sobic003G201300 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic006G075801--Sobic010G158200 Sobic006G075801--Sobic002G326000 Sobic006G075801--Sobic003G337100 Sobic006G075801--Sobic006G239100 Sobic006G075801--Sobic009G167300 Sobic006G075801--Sobic004G342900 Sobic005G231201 Sobic005G231201 Sobic006G075801--Sobic005G231201 Sobic006G075801--Sobic010G045200 Sobic003G022800 Sobic003G022800 Sobic006G075801--Sobic003G022800 Sobic006G209100 Sobic006G209100 Sobic009G167300--Sobic006G209100 Sobic009G167300--Sobic003G201300 Sobic009G167300--Sobic010G231400 Sobic006G201200 Sobic006G201200 Sobic009G167300--Sobic006G201200 Sobic009G164200 Sobic009G164200 Sobic009G167300--Sobic009G164200 Sobic001G361500 Sobic001G361500 Sobic009G167300--Sobic001G361500 Sobic006G185400 Sobic006G185400 Sobic009G167300--Sobic006G185400 Sobic001G172900 Sobic001G172900 Sobic009G167300--Sobic001G172900 Sobic004G330500 Sobic004G330500 Sobic009G167300--Sobic004G330500 Sobic003G283500--Sobic002G326000 Sobic003G283500--Sobic004G300701 Sobic004G025200 Sobic004G025200 Sobic003G283500--Sobic004G025200 Sobic003G283500--Sobic004G342900 Sobic009G165300 Sobic009G165300 Sobic003G283500--Sobic009G165300 Sobic003G283500--Sobic005G016600 Sobic002G420200 Sobic002G420200 Sobic003G283500--Sobic002G420200 Sobic006G134001 Sobic006G134001 Sobic003G283500--Sobic006G134001 Sobic003G283500--Sobic010G158200 Sobic002G253000--Sobic002G318501 Sobic010G057100 Sobic010G057100 Sobic002G253000--Sobic010G057100 Sobic009G015000 Sobic009G015000 Sobic002G253000--Sobic009G015000 Sobic002G253000--Sobic005G016600 Sobic002G314700 Sobic002G314700 Sobic002G253000--Sobic002G314700 Sobic002G253000--Sobic004G342900 Sobic004G099500 Sobic004G099500 Sobic002G253000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic002G253000--Sobic004G128000 Sobic001G062600 Sobic001G062600 Sobic002G253000--Sobic001G062600 Sobic010G045200--Sobic005G231201 Sobic010G045200--Sobic009G167300 Sobic010G045200--Sobic006G239100 Sobic010G045200--Sobic009G164200 Sobic010G045200--Sobic010G231400 Sobic010G045200--Sobic006G201200 Sobic008G127600 Sobic008G127600 Sobic010G045200--Sobic008G127600 Sobic004G098200 Sobic004G098200 Sobic010G045200--Sobic004G098200 Sobic010G045200--Sobic001G172900 Sobic003G213600 Sobic003G213600 Sobic001G388900--Sobic003G213600 Sobic001G251300 Sobic001G251300 Sobic001G388900--Sobic001G251300 Sobic001G388900--Sobic003G337100 Sobic001G388900--Sobic002G326000 Sobic001G388900--Sobic010G158200 Sobic009G064100 Sobic009G064100 Sobic001G388900--Sobic009G064100 Sobic007G223900 Sobic007G223900 Sobic001G388900--Sobic007G223900 Sobic001G388900--Sobic006G075801 Sobic001G388900--Sobic003G283500
Octagon: transcription factors


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