Gene annotation
Transcriptome id Sobic.006G239100.2
Synonym
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1Z5RGE7
Pfam PF05678
Panther DB PTHR33402
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80450 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os04g55240.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009558 , Zm00025a057194
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.009G010800 expressed protein -
3 Sobic.007G072901 - -
4 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
5 Sobic.004G351866 - -
6 Sobic.003G357000 - -
7 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
8 Sobic.006G209100 - -
9 Sobic.001G361500 expressed protein -
10 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
11 Sobic.008G023500 expressed protein -
12 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.006G185400 - -
14 Sobic.004G330500 expressed protein -
15 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
16 Sobic.002G205201 - -
17 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -
18 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
19 Sobic.001G172900 - -
20 Sobic.005G037500 expressed protein -


Gene co-expression network
sample Sobic006G239100 Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic006G239100--Sobic010G231400 Sobic009G010800 Sobic009G010800 Sobic006G239100--Sobic009G010800 Sobic007G072901 Sobic007G072901 Sobic006G239100--Sobic007G072901 Sobic009G164200 Sobic009G164200 Sobic006G239100--Sobic009G164200 Sobic004G351866 Sobic004G351866 Sobic006G239100--Sobic004G351866 Sobic003G357000 Sobic003G357000 Sobic006G239100--Sobic003G357000 Sobic005G022400 Sobic005G022400 Sobic006G239100--Sobic005G022400 Sobic006G209100 Sobic006G209100 Sobic006G239100--Sobic006G209100 Sobic001G361500 Sobic001G361500 Sobic006G239100--Sobic001G361500 Sobic007G152200 Sobic007G152200 Sobic010G231400--Sobic007G152200 Sobic010G231400--Sobic006G209100 Sobic010G231400--Sobic009G164200 Sobic004G330500 Sobic004G330500 Sobic010G231400--Sobic004G330500 Sobic006G185400 Sobic006G185400 Sobic010G231400--Sobic006G185400 Sobic010G231400--Sobic001G361500 Sobic005G189400 Sobic005G189400 Sobic010G231400--Sobic005G189400 Sobic002G205201 Sobic002G205201 Sobic010G231400--Sobic002G205201 Sobic008G023500 Sobic008G023500 Sobic010G231400--Sobic008G023500 Sobic009G010800--Sobic006G185400 Sobic009G010800--Sobic004G330500 Sobic009G010800--Sobic005G189400 Sobic009G010800--Sobic001G361500 Sobic009G010800--Sobic002G205201 Sobic009G010800--Sobic006G209100 Sobic009G010800--Sobic007G152200 Sobic009G010800--Sobic008G023500 Sobic003G245700 Sobic003G245700 Sobic009G010800--Sobic003G245700 Sobic007G072901--Sobic004G351866 Sobic007G072901--Sobic008G023500 Sobic007G072901--Sobic005G189400 Sobic006G090201 Sobic006G090201 Sobic007G072901--Sobic006G090201 Sobic007G072901--Sobic003G245700 Sobic007G072901--Sobic004G330500 Sobic007G072901--Sobic006G185400 Sobic007G072901--Sobic007G152200 Sobic007G072901--Sobic003G357000 Sobic009G164200--Sobic004G330500 Sobic009G164200--Sobic006G185400 Sobic009G164200--Sobic008G023500 Sobic009G164200--Sobic005G189400 Sobic009G164200--Sobic001G361500 Sobic009G164200--Sobic006G209100 Sobic009G164200--Sobic007G152200 Sobic009G164200--Sobic002G205201 Sobic005G037500 Sobic005G037500 Sobic009G164200--Sobic005G037500 Sobic004G351866--Sobic007G072901 Sobic004G351866--Sobic008G023500 Sobic004G351866--Sobic003G357000 Sobic004G351866--Sobic004G330500 Sobic004G351866--Sobic005G189400 Sobic004G351866--Sobic006G185400 Sobic002G037000 Sobic002G037000 Sobic004G351866--Sobic002G037000 Sobic004G351866--Sobic005G037500 Sobic004G351866--Sobic007G152200 Sobic003G357000--Sobic008G023500 Sobic003G357000--Sobic004G351866 Sobic003G357000--Sobic006G185400 Sobic003G357000--Sobic004G330500 Sobic003G357000--Sobic005G189400 Sobic003G357000--Sobic009G164200 Sobic003G357000--Sobic002G205201 Sobic003G357000--Sobic001G361500 Sobic003G357000--Sobic006G209100 Sobic005G022400--Sobic008G023500 Sobic005G022400--Sobic009G010800 Sobic005G022400--Sobic007G072901 Sobic005G022400--Sobic003G245700 Sobic005G022400--Sobic007G152200 Sobic005G022400--Sobic005G189400 Sobic005G022400--Sobic004G330500 Sobic005G022400--Sobic006G185400 Sobic005G022400--Sobic006G090201 Sobic006G209100--Sobic006G185400 Sobic006G209100--Sobic004G330500 Sobic006G209100--Sobic005G189400 Sobic006G209100--Sobic001G361500 Sobic006G209100--Sobic002G205201 Sobic006G209100--Sobic007G152200 Sobic006G209100--Sobic009G164200 Sobic006G209100--Sobic008G023500 Sobic006G209100--Sobic005G037500 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic001G361500--Sobic008G023500 Sobic001G361500--Sobic005G037500
Octagon: transcription factors


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