Gene annotation
Transcriptome id Sobic.003G337100.1
Synonym Sb03g038130
Functional annotation expressed protein
UniProt C5XN95
Pfam PF11331
Panther DB PTHR31105 PTHR31105:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05190 : Protein of unknown function (DUF3133)
RAP-DB (Rice) LOC_Os01g60420.1 : expressed protein
MaizeGDB (Corn) Zm00025a039773 , Zm00025a027070
Brachypodium -
Barley HORVU3Hr1G080770.4 , HORVU3Hr1G080770.3 , HORVU3Hr1G080770.2 , HORVU3Hr1G080770.1
Wheat TraesCS1D02G301000 , TraesCS1B02G311100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G167300 CCT motif family protein, expressed -
2 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
3 Sobic.002G326000 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
4 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G045200 expressed protein -
6 Sobic.006G075801 - -
7 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
8 Sobic.006G239100 VQ domain containing protein, putative, expressed -
9 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.005G087600 AP2 domain containing protein, expressed -
11 Sobic.005G231201 - -
12 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
13 Sobic.003G213600 expressed protein -
14 Sobic.010G099400 metalloendoproteinase 1 precursor, putative, expressed -
15 Sobic.004G324900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
17 Sobic.006G209100 - -
18 Sobic.001G361500 expressed protein -
19 Sobic.004G300701 - -
20 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic003G337100 Sobic003G337100 Sobic009G167300 Sobic009G167300 Sobic003G337100--Sobic009G167300 Sobic004G342900 Sobic004G342900 Sobic003G337100--Sobic004G342900 Sobic002G326000 Sobic002G326000 Sobic003G337100--Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic003G337100--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G337100--Sobic010G045200 Sobic006G075801 Sobic006G075801 Sobic003G337100--Sobic006G075801 Sobic003G201300 Sobic003G201300 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic006G209100 Sobic006G209100 Sobic009G167300--Sobic006G209100 Sobic009G167300--Sobic003G201300 Sobic009G167300--Sobic010G231400 Sobic006G201200 Sobic006G201200 Sobic009G167300--Sobic006G201200 Sobic009G164200 Sobic009G164200 Sobic009G167300--Sobic009G164200 Sobic001G361500 Sobic001G361500 Sobic009G167300--Sobic001G361500 Sobic006G185400 Sobic006G185400 Sobic009G167300--Sobic006G185400 Sobic001G172900 Sobic001G172900 Sobic009G167300--Sobic001G172900 Sobic004G330500 Sobic004G330500 Sobic009G167300--Sobic004G330500 Sobic004G342900--Sobic003G337100 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G300701 Sobic004G300701 Sobic004G342900--Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G342900--Sobic003G283500 Sobic004G342900--Sobic009G167300 Sobic002G326000--Sobic010G158200 Sobic002G326000--Sobic004G342900 Sobic002G326000--Sobic003G337100 Sobic002G326000--Sobic006G075801 Sobic002G326000--Sobic009G167300 Sobic002G326000--Sobic003G283500 Sobic002G326000--Sobic002G253000 Sobic002G326000--Sobic010G045200 Sobic001G388900 Sobic001G388900 Sobic002G326000--Sobic001G388900 Sobic010G158200--Sobic006G075801 Sobic010G158200--Sobic002G326000 Sobic010G158200--Sobic003G337100 Sobic010G158200--Sobic004G342900 Sobic010G125400 Sobic010G125400 Sobic010G158200--Sobic010G125400 Sobic010G158200--Sobic002G253000 Sobic002G171600 Sobic002G171600 Sobic010G158200--Sobic002G171600 Sobic002G318501 Sobic002G318501 Sobic010G158200--Sobic002G318501 Sobic010G158200--Sobic009G167300 Sobic005G231201 Sobic005G231201 Sobic010G045200--Sobic005G231201 Sobic010G045200--Sobic009G167300 Sobic010G045200--Sobic006G239100 Sobic010G045200--Sobic009G164200 Sobic010G045200--Sobic010G231400 Sobic010G045200--Sobic006G201200 Sobic008G127600 Sobic008G127600 Sobic010G045200--Sobic008G127600 Sobic004G098200 Sobic004G098200 Sobic010G045200--Sobic004G098200 Sobic010G045200--Sobic001G172900 Sobic006G075801--Sobic010G158200 Sobic006G075801--Sobic002G326000 Sobic006G075801--Sobic003G337100 Sobic006G075801--Sobic006G239100 Sobic006G075801--Sobic009G167300 Sobic006G075801--Sobic004G342900 Sobic006G075801--Sobic005G231201 Sobic006G075801--Sobic010G045200 Sobic003G022800 Sobic003G022800 Sobic006G075801--Sobic003G022800 Sobic008G078600 Sobic008G078600 Sobic003G201300--Sobic008G078600 Sobic003G201300--Sobic001G361500 Sobic003G201300--Sobic009G164200 Sobic009G116766 Sobic009G116766 Sobic003G201300--Sobic009G116766 Sobic007G224800 Sobic007G224800 Sobic003G201300--Sobic007G224800 Sobic003G201300--Sobic009G167300 Sobic003G201300--Sobic006G209100 Sobic005G087600 Sobic005G087600 Sobic003G201300--Sobic005G087600 Sobic003G201300--Sobic010G231400 Sobic006G239100--Sobic010G231400 Sobic009G010800 Sobic009G010800 Sobic006G239100--Sobic009G010800 Sobic007G072901 Sobic007G072901 Sobic006G239100--Sobic007G072901 Sobic006G239100--Sobic009G164200 Sobic004G351866 Sobic004G351866 Sobic006G239100--Sobic004G351866 Sobic003G357000 Sobic003G357000 Sobic006G239100--Sobic003G357000 Sobic005G022400 Sobic005G022400 Sobic006G239100--Sobic005G022400 Sobic006G239100--Sobic006G209100 Sobic006G239100--Sobic001G361500 Sobic007G152200 Sobic007G152200 Sobic010G231400--Sobic007G152200 Sobic010G231400--Sobic006G209100 Sobic010G231400--Sobic009G164200 Sobic010G231400--Sobic004G330500 Sobic010G231400--Sobic006G185400 Sobic010G231400--Sobic001G361500 Sobic005G189400 Sobic005G189400 Sobic010G231400--Sobic005G189400 Sobic002G205201 Sobic002G205201 Sobic010G231400--Sobic002G205201 Sobic008G023500 Sobic008G023500 Sobic010G231400--Sobic008G023500
Octagon: transcription factors


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