Gene annotation
Transcriptome id Sobic.005G087600.2
Synonym
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1Z5RHE2
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G71450 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os11g13840.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029538
Brachypodium KQJ88800
Barley HORVU4Hr1G015350.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G026100 expressed protein -
2 Sobic.001G361500 expressed protein -
3 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.006G185400 - -
6 Sobic.006G090201 - -
7 Sobic.006G209100 - -
8 Sobic.004G330500 expressed protein -
9 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.002G205201 - -
11 Sobic.005G037500 expressed protein -
12 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -
13 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
14 Sobic.008G023500 expressed protein -
15 Sobic.002G037000 ZOS7-02 - C2H2 zinc finger protein, expressed -
16 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
17 Sobic.007G072901 - -
18 Sobic.001G172900 - -
19 Sobic.009G010800 expressed protein -
20 Sobic.010G275550 - -


Gene co-expression network
sample Sobic005G087600 Sobic005G087600 Sobic003G026100 Sobic003G026100 Sobic005G087600--Sobic003G026100 Sobic001G361500 Sobic001G361500 Sobic005G087600--Sobic001G361500 Sobic009G164200 Sobic009G164200 Sobic005G087600--Sobic009G164200 Sobic010G231400 Sobic010G231400 Sobic005G087600--Sobic010G231400 Sobic006G185400 Sobic006G185400 Sobic005G087600--Sobic006G185400 Sobic006G090201 Sobic006G090201 Sobic005G087600--Sobic006G090201 Sobic006G209100 Sobic006G209100 Sobic005G087600--Sobic006G209100 Sobic004G330500 Sobic004G330500 Sobic005G087600--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic005G087600--Sobic005G189400 Sobic003G026100--Sobic001G361500 Sobic003G026100--Sobic005G087600 Sobic010G014600 Sobic010G014600 Sobic003G026100--Sobic010G014600 Sobic003G026100--Sobic005G189400 Sobic003G026100--Sobic004G330500 Sobic003G026100--Sobic006G185400 Sobic003G026100--Sobic006G090201 Sobic007G152200 Sobic007G152200 Sobic003G026100--Sobic007G152200 Sobic003G026100--Sobic009G164200 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic002G205201 Sobic002G205201 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic008G023500 Sobic008G023500 Sobic001G361500--Sobic008G023500 Sobic005G037500 Sobic005G037500 Sobic001G361500--Sobic005G037500 Sobic009G164200--Sobic004G330500 Sobic009G164200--Sobic006G185400 Sobic009G164200--Sobic008G023500 Sobic009G164200--Sobic005G189400 Sobic009G164200--Sobic001G361500 Sobic009G164200--Sobic006G209100 Sobic009G164200--Sobic007G152200 Sobic009G164200--Sobic002G205201 Sobic009G164200--Sobic005G037500 Sobic010G231400--Sobic007G152200 Sobic010G231400--Sobic006G209100 Sobic010G231400--Sobic009G164200 Sobic010G231400--Sobic004G330500 Sobic010G231400--Sobic006G185400 Sobic010G231400--Sobic001G361500 Sobic010G231400--Sobic005G189400 Sobic010G231400--Sobic002G205201 Sobic010G231400--Sobic008G023500 Sobic006G185400--Sobic004G330500 Sobic006G185400--Sobic005G189400 Sobic006G185400--Sobic001G361500 Sobic006G185400--Sobic007G152200 Sobic006G185400--Sobic002G205201 Sobic006G185400--Sobic006G209100 Sobic006G185400--Sobic008G023500 Sobic006G185400--Sobic005G037500 Sobic006G185400--Sobic009G164200 Sobic006G090201--Sobic005G189400 Sobic006G090201--Sobic004G330500 Sobic006G090201--Sobic006G185400 Sobic006G090201--Sobic007G152200 Sobic006G090201--Sobic006G209100 Sobic003G245700 Sobic003G245700 Sobic006G090201--Sobic003G245700 Sobic006G090201--Sobic001G361500 Sobic006G090201--Sobic008G023500 Sobic006G090201--Sobic002G205201 Sobic006G209100--Sobic006G185400 Sobic006G209100--Sobic004G330500 Sobic006G209100--Sobic005G189400 Sobic006G209100--Sobic001G361500 Sobic006G209100--Sobic002G205201 Sobic006G209100--Sobic007G152200 Sobic006G209100--Sobic009G164200 Sobic006G209100--Sobic008G023500 Sobic006G209100--Sobic005G037500 Sobic004G330500--Sobic005G189400 Sobic004G330500--Sobic006G185400 Sobic004G330500--Sobic007G152200 Sobic004G330500--Sobic002G205201 Sobic004G330500--Sobic001G361500 Sobic004G330500--Sobic006G209100 Sobic004G330500--Sobic008G023500 Sobic004G330500--Sobic005G037500 Sobic004G330500--Sobic006G090201 Sobic005G189400--Sobic004G330500 Sobic005G189400--Sobic006G185400 Sobic005G189400--Sobic007G152200 Sobic005G189400--Sobic002G205201 Sobic005G189400--Sobic001G361500 Sobic005G189400--Sobic006G209100 Sobic005G189400--Sobic008G023500 Sobic005G189400--Sobic003G245700 Sobic005G189400--Sobic006G090201
Octagon: transcription factors


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