Gene annotation
Transcriptome id Sobic.003G201300.1
Synonym
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt A0A1B6Q4E1
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF169
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G54400 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os05g51440.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G078600 NADP-dependent oxidoreductase, putative, expressed -
2 Sobic.001G361500 expressed protein -
3 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.009G116766 - -
5 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.009G167300 CCT motif family protein, expressed -
7 Sobic.006G209100 - -
8 Sobic.005G087600 AP2 domain containing protein, expressed -
9 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
11 Sobic.006G185400 - -
12 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.004G330500 expressed protein -
14 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
15 Sobic.006G090201 - -
16 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
17 Sobic.005G037500 expressed protein -
18 Sobic.002G037000 ZOS7-02 - C2H2 zinc finger protein, expressed -
19 Sobic.002G205201 - -
20 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -


Gene co-expression network
sample Sobic003G201300 Sobic003G201300 Sobic008G078600 Sobic008G078600 Sobic003G201300--Sobic008G078600 Sobic001G361500 Sobic001G361500 Sobic003G201300--Sobic001G361500 Sobic009G164200 Sobic009G164200 Sobic003G201300--Sobic009G164200 Sobic009G116766 Sobic009G116766 Sobic003G201300--Sobic009G116766 Sobic007G224800 Sobic007G224800 Sobic003G201300--Sobic007G224800 Sobic009G167300 Sobic009G167300 Sobic003G201300--Sobic009G167300 Sobic006G209100 Sobic006G209100 Sobic003G201300--Sobic006G209100 Sobic005G087600 Sobic005G087600 Sobic003G201300--Sobic005G087600 Sobic010G231400 Sobic010G231400 Sobic003G201300--Sobic010G231400 Sobic008G078600--Sobic003G201300 Sobic008G078600--Sobic001G361500 Sobic003G343100 Sobic003G343100 Sobic008G078600--Sobic003G343100 Sobic008G078600--Sobic009G164200 Sobic005G189400 Sobic005G189400 Sobic008G078600--Sobic005G189400 Sobic004G330500 Sobic004G330500 Sobic008G078600--Sobic004G330500 Sobic006G090201 Sobic006G090201 Sobic008G078600--Sobic006G090201 Sobic006G185400 Sobic006G185400 Sobic008G078600--Sobic006G185400 Sobic007G152200 Sobic007G152200 Sobic008G078600--Sobic007G152200 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic002G205201 Sobic002G205201 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic008G023500 Sobic008G023500 Sobic001G361500--Sobic008G023500 Sobic005G037500 Sobic005G037500 Sobic001G361500--Sobic005G037500 Sobic009G164200--Sobic004G330500 Sobic009G164200--Sobic006G185400 Sobic009G164200--Sobic008G023500 Sobic009G164200--Sobic005G189400 Sobic009G164200--Sobic001G361500 Sobic009G164200--Sobic006G209100 Sobic009G164200--Sobic007G152200 Sobic009G164200--Sobic002G205201 Sobic009G164200--Sobic005G037500 Sobic009G116766--Sobic009G164200 Sobic009G116766--Sobic003G201300 Sobic009G116766--Sobic001G361500 Sobic003G423100 Sobic003G423100 Sobic009G116766--Sobic003G423100 Sobic009G116766--Sobic006G090201 Sobic009G116766--Sobic004G330500 Sobic009G116766--Sobic006G185400 Sobic003G245700 Sobic003G245700 Sobic009G116766--Sobic003G245700 Sobic009G116766--Sobic005G189400 Sobic007G224800--Sobic003G201300 Sobic007G224800--Sobic008G078600 Sobic007G224800--Sobic009G116766 Sobic001G430000 Sobic001G430000 Sobic007G224800--Sobic001G430000 Sobic010G036200 Sobic010G036200 Sobic007G224800--Sobic010G036200 Sobic007G224800--Sobic005G087600 Sobic007G224800--Sobic001G361500 Sobic007G224800--Sobic009G164200 Sobic003G026100 Sobic003G026100 Sobic007G224800--Sobic003G026100 Sobic009G167300--Sobic006G209100 Sobic009G167300--Sobic003G201300 Sobic009G167300--Sobic010G231400 Sobic006G201200 Sobic006G201200 Sobic009G167300--Sobic006G201200 Sobic009G167300--Sobic009G164200 Sobic009G167300--Sobic001G361500 Sobic009G167300--Sobic006G185400 Sobic001G172900 Sobic001G172900 Sobic009G167300--Sobic001G172900 Sobic009G167300--Sobic004G330500 Sobic006G209100--Sobic006G185400 Sobic006G209100--Sobic004G330500 Sobic006G209100--Sobic005G189400 Sobic006G209100--Sobic001G361500 Sobic006G209100--Sobic002G205201 Sobic006G209100--Sobic007G152200 Sobic006G209100--Sobic009G164200 Sobic006G209100--Sobic008G023500 Sobic006G209100--Sobic005G037500 Sobic005G087600--Sobic003G026100 Sobic005G087600--Sobic001G361500 Sobic005G087600--Sobic009G164200 Sobic005G087600--Sobic010G231400 Sobic005G087600--Sobic006G185400 Sobic005G087600--Sobic006G090201 Sobic005G087600--Sobic006G209100 Sobic005G087600--Sobic004G330500 Sobic005G087600--Sobic005G189400 Sobic010G231400--Sobic007G152200 Sobic010G231400--Sobic006G209100 Sobic010G231400--Sobic009G164200 Sobic010G231400--Sobic004G330500 Sobic010G231400--Sobic006G185400 Sobic010G231400--Sobic001G361500 Sobic010G231400--Sobic005G189400 Sobic010G231400--Sobic002G205201 Sobic010G231400--Sobic008G023500
Octagon: transcription factors


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