Gene annotation
Transcriptome id Sobic.007G169000.1
Synonym Sb07g024160
Functional annotation similar to Putative uncharacterized protein P0562A06.5 (PubMedID : 29862293)
harpin-induced protein 1 domain containing protein, expressed
UniProt C5YN73
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44380 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os08g44410.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005606
Brachypodium -
Barley HORVU7Hr1G059230.2 , HORVU7Hr1G059230.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
2 Sobic.002G171600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
3 Sobic.007G209100 expressed protein -
4 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
5 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
7 Sobic.003G337100 expressed protein -
8 Sobic.003G364700 expressed protein -
9 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
10 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
11 Sobic.006G075801 - -
12 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
13 Sobic.009G167300 CCT motif family protein, expressed -
14 Sobic.001G511200 expressed protein -
15 Sobic.001G049000 OsFBD9 - F-box and FBD domain containing protein, expressed -
16 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
17 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
19 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G229100 expressed protein -


Gene co-expression network
sample Sobic007G169000 Sobic007G169000 Sobic003G022800 Sobic003G022800 Sobic007G169000--Sobic003G022800 Sobic002G171600 Sobic002G171600 Sobic007G169000--Sobic002G171600 Sobic007G209100 Sobic007G209100 Sobic007G169000--Sobic007G209100 Sobic004G342900 Sobic004G342900 Sobic007G169000--Sobic004G342900 Sobic004G296100 Sobic004G296100 Sobic007G169000--Sobic004G296100 Sobic009G178900 Sobic009G178900 Sobic007G169000--Sobic009G178900 Sobic003G337100 Sobic003G337100 Sobic007G169000--Sobic003G337100 Sobic003G364700 Sobic003G364700 Sobic007G169000--Sobic003G364700 Sobic003G047300 Sobic003G047300 Sobic007G169000--Sobic003G047300 Sobic003G022800--Sobic007G169000 Sobic010G045200 Sobic010G045200 Sobic003G022800--Sobic010G045200 Sobic004G356600 Sobic004G356600 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic008G086401 Sobic008G086401 Sobic003G022800--Sobic008G086401 Sobic009G167300 Sobic009G167300 Sobic003G022800--Sobic009G167300 Sobic003G201300 Sobic003G201300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic005G087600 Sobic005G087600 Sobic003G022800--Sobic005G087600 Sobic002G171600--Sobic007G169000 Sobic002G171600--Sobic007G209100 Sobic010G158200 Sobic010G158200 Sobic002G171600--Sobic010G158200 Sobic002G171600--Sobic004G342900 Sobic002G171600--Sobic003G337100 Sobic002G171600--Sobic004G296100 Sobic002G326000 Sobic002G326000 Sobic002G171600--Sobic002G326000 Sobic002G171600--Sobic003G022800 Sobic006G075801 Sobic006G075801 Sobic002G171600--Sobic006G075801 Sobic007G209100--Sobic002G171600 Sobic007G209100--Sobic007G169000 Sobic004G300701 Sobic004G300701 Sobic007G209100--Sobic004G300701 Sobic007G168400 Sobic007G168400 Sobic007G209100--Sobic007G168400 Sobic007G209100--Sobic009G178900 Sobic001G511200 Sobic001G511200 Sobic007G209100--Sobic001G511200 Sobic007G209100--Sobic004G296100 Sobic007G209100--Sobic003G364700 Sobic004G049800 Sobic004G049800 Sobic007G209100--Sobic004G049800 Sobic004G342900--Sobic003G337100 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G342900--Sobic003G283500 Sobic004G342900--Sobic009G167300 Sobic004G296100--Sobic004G049800 Sobic004G296100--Sobic003G047300 Sobic009G070000 Sobic009G070000 Sobic004G296100--Sobic009G070000 Sobic006G271100 Sobic006G271100 Sobic004G296100--Sobic006G271100 Sobic005G111600 Sobic005G111600 Sobic004G296100--Sobic005G111600 Sobic002G025300 Sobic002G025300 Sobic004G296100--Sobic002G025300 Sobic002G206400 Sobic002G206400 Sobic004G296100--Sobic002G206400 Sobic008G144300 Sobic008G144300 Sobic004G296100--Sobic008G144300 Sobic004G296100--Sobic007G169000 Sobic009G178900--Sobic001G511200 Sobic006G069500 Sobic006G069500 Sobic009G178900--Sobic006G069500 Sobic003G273800 Sobic003G273800 Sobic009G178900--Sobic003G273800 Sobic004G180400 Sobic004G180400 Sobic009G178900--Sobic004G180400 Sobic009G178900--Sobic003G364700 Sobic009G233600 Sobic009G233600 Sobic009G178900--Sobic009G233600 Sobic004G077100 Sobic004G077100 Sobic009G178900--Sobic004G077100 Sobic005G016300 Sobic005G016300 Sobic009G178900--Sobic005G016300 Sobic009G178900--Sobic006G271100 Sobic003G337100--Sobic009G167300 Sobic003G337100--Sobic004G342900 Sobic003G337100--Sobic002G326000 Sobic003G337100--Sobic010G158200 Sobic003G337100--Sobic010G045200 Sobic003G337100--Sobic006G075801 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic009G229100 Sobic009G229100 Sobic003G364700--Sobic009G229100 Sobic003G364700--Sobic001G511200 Sobic002G356700 Sobic002G356700 Sobic003G364700--Sobic002G356700 Sobic007G051501 Sobic007G051501 Sobic003G364700--Sobic007G051501 Sobic003G364700--Sobic009G233600 Sobic005G022400 Sobic005G022400 Sobic003G364700--Sobic005G022400 Sobic003G423100 Sobic003G423100 Sobic003G364700--Sobic003G423100 Sobic003G178200 Sobic003G178200 Sobic003G364700--Sobic003G178200 Sobic003G364700--Sobic009G070000 Sobic003G047300--Sobic009G070000 Sobic003G047300--Sobic006G271100 Sobic001G049000 Sobic001G049000 Sobic003G047300--Sobic001G049000 Sobic003G047300--Sobic004G296100 Sobic003G047300--Sobic005G111600 Sobic003G047300--Sobic003G364700 Sobic010G145200 Sobic010G145200 Sobic003G047300--Sobic010G145200 Sobic003G047300--Sobic009G229100 Sobic003G047300--Sobic004G049800
Octagon: transcription factors


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