Gene annotation
Transcriptome id Sobic.007G209100.1
Synonym Sb07g027640
Functional annotation expressed protein
UniProt C5YIR0
Pfam -
Panther DB PTHR35714 PTHR35714:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35320 : -
RAP-DB (Rice) LOC_Os08g40060.1 : expressed protein
MaizeGDB (Corn) Zm00025a033815 , Zm00025a005112
Brachypodium -
Barley HORVU7Hr1G050980.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G171600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.007G169000 similar to Putative uncharacterized protein P0562A06.5(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.004G300701 - -
4 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
6 Sobic.001G511200 expressed protein -
7 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G364700 expressed protein -
9 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
11 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.010G013100 expressed protein -
13 Sobic.006G069500 glutaredoxin, putative, expressed -
14 Sobic.004G025200 expressed protein -
15 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
16 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.001G216800 expressed protein -
19 Sobic.004G147400 dirigent, putative, expressed -
20 Sobic.007G051501 - -


Gene co-expression network
sample Sobic007G209100 Sobic007G209100 Sobic002G171600 Sobic002G171600 Sobic007G209100--Sobic002G171600 Sobic007G169000 Sobic007G169000 Sobic007G209100--Sobic007G169000 Sobic004G300701 Sobic004G300701 Sobic007G209100--Sobic004G300701 Sobic007G168400 Sobic007G168400 Sobic007G209100--Sobic007G168400 Sobic009G178900 Sobic009G178900 Sobic007G209100--Sobic009G178900 Sobic001G511200 Sobic001G511200 Sobic007G209100--Sobic001G511200 Sobic004G296100 Sobic004G296100 Sobic007G209100--Sobic004G296100 Sobic003G364700 Sobic003G364700 Sobic007G209100--Sobic003G364700 Sobic004G049800 Sobic004G049800 Sobic007G209100--Sobic004G049800 Sobic002G171600--Sobic007G169000 Sobic002G171600--Sobic007G209100 Sobic010G158200 Sobic010G158200 Sobic002G171600--Sobic010G158200 Sobic004G342900 Sobic004G342900 Sobic002G171600--Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic002G171600--Sobic003G337100 Sobic002G171600--Sobic004G296100 Sobic002G326000 Sobic002G326000 Sobic002G171600--Sobic002G326000 Sobic003G022800 Sobic003G022800 Sobic002G171600--Sobic003G022800 Sobic006G075801 Sobic006G075801 Sobic002G171600--Sobic006G075801 Sobic007G169000--Sobic003G022800 Sobic007G169000--Sobic002G171600 Sobic007G169000--Sobic007G209100 Sobic007G169000--Sobic004G342900 Sobic007G169000--Sobic004G296100 Sobic007G169000--Sobic009G178900 Sobic007G169000--Sobic003G337100 Sobic007G169000--Sobic003G364700 Sobic003G047300 Sobic003G047300 Sobic007G169000--Sobic003G047300 Sobic003G283500 Sobic003G283500 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic001G430000 Sobic001G430000 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G300701--Sobic004G342900 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic005G016600 Sobic005G016600 Sobic004G300701--Sobic005G016600 Sobic003G201300 Sobic003G201300 Sobic004G300701--Sobic003G201300 Sobic004G259700 Sobic004G259700 Sobic007G168400--Sobic004G259700 Sobic007G168400--Sobic010G013100 Sobic001G416900 Sobic001G416900 Sobic007G168400--Sobic001G416900 Sobic004G099500 Sobic004G099500 Sobic007G168400--Sobic004G099500 Sobic009G167500 Sobic009G167500 Sobic007G168400--Sobic009G167500 Sobic002G276000 Sobic002G276000 Sobic007G168400--Sobic002G276000 Sobic003G057600 Sobic003G057600 Sobic007G168400--Sobic003G057600 Sobic001G054800 Sobic001G054800 Sobic007G168400--Sobic001G054800 Sobic001G009700 Sobic001G009700 Sobic007G168400--Sobic001G009700 Sobic009G178900--Sobic001G511200 Sobic006G069500 Sobic006G069500 Sobic009G178900--Sobic006G069500 Sobic003G273800 Sobic003G273800 Sobic009G178900--Sobic003G273800 Sobic004G180400 Sobic004G180400 Sobic009G178900--Sobic004G180400 Sobic009G178900--Sobic003G364700 Sobic009G233600 Sobic009G233600 Sobic009G178900--Sobic009G233600 Sobic004G077100 Sobic004G077100 Sobic009G178900--Sobic004G077100 Sobic005G016300 Sobic005G016300 Sobic009G178900--Sobic005G016300 Sobic006G271100 Sobic006G271100 Sobic009G178900--Sobic006G271100 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic009G229100 Sobic009G229100 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic002G356700 Sobic002G356700 Sobic001G511200--Sobic002G356700 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic001G511200--Sobic003G201300 Sobic004G296100--Sobic004G049800 Sobic004G296100--Sobic003G047300 Sobic009G070000 Sobic009G070000 Sobic004G296100--Sobic009G070000 Sobic004G296100--Sobic006G271100 Sobic005G111600 Sobic005G111600 Sobic004G296100--Sobic005G111600 Sobic002G025300 Sobic002G025300 Sobic004G296100--Sobic002G025300 Sobic002G206400 Sobic002G206400 Sobic004G296100--Sobic002G206400 Sobic008G144300 Sobic008G144300 Sobic004G296100--Sobic008G144300 Sobic004G296100--Sobic007G169000 Sobic003G364700--Sobic009G229100 Sobic003G364700--Sobic001G511200 Sobic003G364700--Sobic002G356700 Sobic007G051501 Sobic007G051501 Sobic003G364700--Sobic007G051501 Sobic003G364700--Sobic009G233600 Sobic005G022400 Sobic005G022400 Sobic003G364700--Sobic005G022400 Sobic003G423100 Sobic003G423100 Sobic003G364700--Sobic003G423100 Sobic003G178200 Sobic003G178200 Sobic003G364700--Sobic003G178200 Sobic003G364700--Sobic009G070000 Sobic004G049800--Sobic004G296100 Sobic004G049800--Sobic006G271100 Sobic004G049800--Sobic009G070000 Sobic004G049800--Sobic003G047300 Sobic004G049800--Sobic001G430000 Sobic004G049800--Sobic001G511200 Sobic003G023666 Sobic003G023666 Sobic004G049800--Sobic003G023666 Sobic004G049800--Sobic008G127200 Sobic004G049800--Sobic003G364700
Octagon: transcription factors


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