Gene annotation
Transcriptome id Sobic.004G147400.1
Synonym Sb04g019550
Functional annotation dirigent, putative, expressed
UniProt C5XRT7
Pfam PF03018
Panther DB PTHR21495 PTHR21495:SF57
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42500 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os11g42500.1 : dirigent, putative, expressed
MaizeGDB (Corn) Zm00025a003840
Brachypodium -
Barley HORVU7Hr1G025180.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G253300 Myb family transcription factor(PubMedID : 26320239)@Myb transcription factor, putative, expressed -
2 Sobic.007G008400 - -
3 Sobic.010G162400 reticuline oxidase-like protein precursor, putative, expressed -
4 Sobic.010G030100 homeobox associated leucine zipper, putative, expressed -
5 Sobic.005G061700 dirigent, putative, expressed -
6 Sobic.002G050100 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.006G009900 expressed protein -
8 Sobic.002G053900 Cupin domain containing protein, expressed -
9 Sobic.004G025200 expressed protein -
10 Sobic.001G012400 "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed K13030: cyanohydrin beta-glucosyltransferase
11 Sobic.008G037200 expressed protein -
12 Sobic.002G045800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
13 Sobic.001G161601 - K14484: auxin-responsive protein IAA
14 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
16 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
17 Sobic.006G166900 transferase family protein, putative, expressed -
18 Sobic.001G190500 dirigent, putative, expressed -
19 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase


Gene co-expression network
sample Sobic004G147400 Sobic004G147400 Sobic009G253300 Sobic009G253300 Sobic004G147400--Sobic009G253300 Sobic007G008400 Sobic007G008400 Sobic004G147400--Sobic007G008400 Sobic010G162400 Sobic010G162400 Sobic004G147400--Sobic010G162400 Sobic010G030100 Sobic010G030100 Sobic004G147400--Sobic010G030100 Sobic005G061700 Sobic005G061700 Sobic004G147400--Sobic005G061700 Sobic002G050100 Sobic002G050100 Sobic004G147400--Sobic002G050100 Sobic006G009900 Sobic006G009900 Sobic004G147400--Sobic006G009900 Sobic002G053900 Sobic002G053900 Sobic004G147400--Sobic002G053900 Sobic004G025200 Sobic004G025200 Sobic004G147400--Sobic004G025200 Sobic009G253300--Sobic004G147400 Sobic003G443200 Sobic003G443200 Sobic009G253300--Sobic003G443200 Sobic009G253300--Sobic002G053900 Sobic009G253300--Sobic002G050100 Sobic009G033400 Sobic009G033400 Sobic009G253300--Sobic009G033400 Sobic009G072800 Sobic009G072800 Sobic009G253300--Sobic009G072800 Sobic002G028500 Sobic002G028500 Sobic009G253300--Sobic002G028500 Sobic005G145100 Sobic005G145100 Sobic009G253300--Sobic005G145100 Sobic009G008800 Sobic009G008800 Sobic009G253300--Sobic009G008800 Sobic006G166900 Sobic006G166900 Sobic007G008400--Sobic006G166900 Sobic007G008400--Sobic004G147400 Sobic007G008400--Sobic009G253300 Sobic004G296100 Sobic004G296100 Sobic007G008400--Sobic004G296100 Sobic007G008400--Sobic005G145100 Sobic008G037200 Sobic008G037200 Sobic007G008400--Sobic008G037200 Sobic007G008400--Sobic002G028500 Sobic001G170900 Sobic001G170900 Sobic007G008400--Sobic001G170900 Sobic001G208600 Sobic001G208600 Sobic007G008400--Sobic001G208600 Sobic001G170700 Sobic001G170700 Sobic010G162400--Sobic001G170700 Sobic010G162400--Sobic004G147400 Sobic001G161601 Sobic001G161601 Sobic010G162400--Sobic001G161601 Sobic010G162400--Sobic009G253300 Sobic007G141200 Sobic007G141200 Sobic010G162400--Sobic007G141200 Sobic002G244300 Sobic002G244300 Sobic010G162400--Sobic002G244300 Sobic001G012400 Sobic001G012400 Sobic010G162400--Sobic001G012400 Sobic001G012500 Sobic001G012500 Sobic010G162400--Sobic001G012500 Sobic002G347300 Sobic002G347300 Sobic010G162400--Sobic002G347300 Sobic010G030100--Sobic004G025200 Sobic004G105100 Sobic004G105100 Sobic010G030100--Sobic004G105100 Sobic001G264300 Sobic001G264300 Sobic010G030100--Sobic001G264300 Sobic002G420200 Sobic002G420200 Sobic010G030100--Sobic002G420200 Sobic010G030100--Sobic004G147400 Sobic002G350700 Sobic002G350700 Sobic010G030100--Sobic002G350700 Sobic006G134001 Sobic006G134001 Sobic010G030100--Sobic006G134001 Sobic003G000200 Sobic003G000200 Sobic010G030100--Sobic003G000200 Sobic010G030100--Sobic001G161601 Sobic001G484000 Sobic001G484000 Sobic005G061700--Sobic001G484000 Sobic005G052500 Sobic005G052500 Sobic005G061700--Sobic005G052500 Sobic005G061700--Sobic002G050100 Sobic005G061700--Sobic004G147400 Sobic001G413700 Sobic001G413700 Sobic005G061700--Sobic001G413700 Sobic005G061700--Sobic009G008800 Sobic005G061700--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic005G061700--Sobic001G046800 Sobic001G300700 Sobic001G300700 Sobic005G061700--Sobic001G300700 Sobic003G341500 Sobic003G341500 Sobic002G050100--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic002G050100--Sobic004G266700 Sobic001G144800 Sobic001G144800 Sobic002G050100--Sobic001G144800 Sobic005G122800 Sobic005G122800 Sobic002G050100--Sobic005G122800 Sobic002G050100--Sobic009G008800 Sobic002G050100--Sobic003G443200 Sobic005G127200 Sobic005G127200 Sobic002G050100--Sobic005G127200 Sobic001G068500 Sobic001G068500 Sobic002G050100--Sobic001G068500 Sobic003G239100 Sobic003G239100 Sobic002G050100--Sobic003G239100 Sobic009G206800 Sobic009G206800 Sobic006G009900--Sobic009G206800 Sobic008G083300 Sobic008G083300 Sobic006G009900--Sobic008G083300 Sobic002G005300 Sobic002G005300 Sobic006G009900--Sobic002G005300 Sobic008G178901 Sobic008G178901 Sobic006G009900--Sobic008G178901 Sobic008G183500 Sobic008G183500 Sobic006G009900--Sobic008G183500 Sobic006G003000 Sobic006G003000 Sobic006G009900--Sobic006G003000 Sobic004G007800 Sobic004G007800 Sobic006G009900--Sobic004G007800 Sobic001G189500 Sobic001G189500 Sobic006G009900--Sobic001G189500 Sobic007G052600 Sobic007G052600 Sobic006G009900--Sobic007G052600 Sobic002G053900--Sobic001G046800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic002G053900--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic002G053900--Sobic010G047600 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic009G215000 Sobic009G215000 Sobic002G053900--Sobic009G215000 Sobic002G053900--Sobic003G239100 Sobic004G025200--Sobic010G030100 Sobic004G025200--Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic004G025200--Sobic009G165300 Sobic004G025200--Sobic008G037200 Sobic001G038400 Sobic001G038400 Sobic004G025200--Sobic001G038400 Sobic004G025200--Sobic006G134001 Sobic001G216800 Sobic001G216800 Sobic004G025200--Sobic001G216800 Sobic006G000400 Sobic006G000400 Sobic004G025200--Sobic006G000400 Sobic003G283500 Sobic003G283500 Sobic004G025200--Sobic003G283500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.