Gene annotation
| Transcriptome id | Sobic.005G061700.1 |
|---|---|
| Synonym | Sb05g005200 |
| Functional annotation | dirigent, putative, expressed |
| UniProt | C5Y657 |
| Pfam | PF03018 |
| Panther DB | PTHR21495 PTHR21495:SF58 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G65870 : Disease resistance-responsive (dirigent-like protein) family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g07830.1 : dirigent, putative, expressed |
| MaizeGDB (Corn) | Zm00025a012798 |
| Brachypodium | - |
| Barley | HORVU5Hr1G115280.1 |
| Wheat | TraesCS4A02G217400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G484000 | hydrolase, alpha/beta fold family protein, putative, expressed | - |
| 2 | Sobic.005G052500 | "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 3 | Sobic.002G050100 | LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 4 | Sobic.004G147400 | dirigent, putative, expressed | - |
| 5 | Sobic.001G413700 | white-brown complex homolog protein, putative, expressed | - |
| 6 | Sobic.009G008800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed | K16290: xylem cysteine proteinase |
| 7 | Sobic.002G053900 | Cupin domain containing protein, expressed | - |
| 8 | Sobic.001G046800 | plastocyanin-like domain containing protein, putative, expressed | - |
| 9 | Sobic.001G300700 | expansin precursor, putative, expressed | - |
| 10 | Sobic.001G144700 | LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 11 | Sobic.009G215000 | - | - |
| 12 | Sobic.004G266700 | hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 13 | Sobic.001G068500 | lysine-rich arabinogalactan protein 19 precursor, putative, expressed | - |
| 14 | Sobic.003G239100 | lipase class 3 family protein, putative, expressed | - |
| 15 | Sobic.002G028500 | app1, putative, expressed | - |
| 16 | Sobic.005G127200 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 17 | Sobic.002G045800 | glucan endo-1,3-beta-glucosidase precursor, putative, expressed | - |
| 18 | Sobic.001G012400 | "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed | K13030: cyanohydrin beta-glucosyltransferase |
| 19 | Sobic.003G352700 | similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed | K05909: laccase |
| 20 | Sobic.009G072800 | proteophosphoglycan ppg4, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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