Gene annotation
Transcriptome id Sobic.001G300700.1
Synonym EXPB2, ATHEXPBETA1.4, ATEXPB2, Sb01g029260
Functional annotation expansin precursor, putative, expressed
UniProt C5WSE8
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os10g40720.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051985 , Zm00025a051983 , Zm00025a051980 , Zm00025a051976 , Zm00025a051978 , Zm00025a051986 , Zm00025a003327 , Zm00025a052026 , Zm00025a052035 , Zm00025a052033 , Zm00025a003332 , Zm00025a003330 , Zm00025a003331 , Zm00025a000113 , Zm00025a003251
Brachypodium KQJ97767 , KQJ97766 , KQJ97765 , KQJ97764 , KQJ97762 , KQJ97768 , KQK24135
Barley HORVU1Hr1G054240.1 , HORVU1Hr1G054240.2 , HORVU6Hr1G005760.1 , HORVU6Hr1G055090.1 , HORVU6Hr1G055090.2 , HORVU4Hr1G088140.3 , HORVU4Hr1G088140.2 , HORVU4Hr1G088140.1 , HORVU1Hr1G054250.9 , HORVU1Hr1G054250.8 , HORVU1Hr1G054250.3 , HORVU1Hr1G054250.2 , HORVU1Hr1G054250.1 , HORVU6Hr1G005810.3 , HORVU6Hr1G005810.4 , HORVU1Hr1G054250.6 , HORVU1Hr1G054250.5 , HORVU3Hr1G073140.1 , HORVU3Hr1G105170.1 , HORVU3Hr1G073120.1 , HORVU3Hr1G105180.1 , HORVU1Hr1G054250.4 , HORVU3Hr1G076110.1 , HORVU6Hr1G005810.2 , HORVU1Hr1G054250.7
Wheat TraesCS4B02G375200 , TraesCS1D02G215500 , TraesCS1D02G215500 , TraesCS5D02G086000 , TraesCS1D02G215100 , TraesCS1B02G226000 , TraesCS3D02G476800 , TraesCS3B02G524500 , TraesCS3D02G474800 , TraesCS6D02G037700 , TraesCS3A02G480000 , TraesCS3D02G000500 , TraesCS1D02G215100 , TraesCSU02G085500 , TraesCS4D02G361700 , TraesCS6D02G037500 , TraesCS1B02G225700 , TraesCS1B02G225700 , TraesCS5A02G537300 , TraesCS1B02G226100 , TraesCS1B02G226100 , TraesCS1B02G226000 , TraesCS1B02G225900 , TraesCS1A02G212300 , TraesCS6A02G032700 , TraesCS6B02G046100 , TraesCS1A02G212000 , TraesCS6B02G046200 , TraesCS1D02G215300 , TraesCS1A02G212600 , TraesCS1A02G212400 , TraesCS5A02G073100 , TraesCS6A02G217100 , TraesCS6D02G198400 , TraesCS3D02G476700 , TraesCS6B02G245700 , TraesCS3A02G479900 , TraesCS1D02G215400 , TraesCS4B02G375600 , TraesCS6B02G046300 , TraesCS5A02G538000 , TraesCS6B02G046000 , TraesCS4D02G361900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G144700 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.002G050100 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
4 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.005G061700 dirigent, putative, expressed -
6 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
7 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
8 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
9 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
10 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
12 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.002G030650 - -
14 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.005G145100 phospholipase A2, putative, expressed -
16 Sobic.002G417600 ATOFP17/OFP17, putative, expressed -
17 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
18 Sobic.010G133932 - -
19 Sobic.002G028500 app1, putative, expressed -
20 Sobic.007G159600 expressed protein -


Gene co-expression network
sample Sobic001G300700 Sobic001G300700 Sobic001G144700 Sobic001G144700 Sobic001G300700--Sobic001G144700 Sobic002G050100 Sobic002G050100 Sobic001G300700--Sobic002G050100 Sobic001G413700 Sobic001G413700 Sobic001G300700--Sobic001G413700 Sobic004G266700 Sobic004G266700 Sobic001G300700--Sobic004G266700 Sobic005G061700 Sobic005G061700 Sobic001G300700--Sobic005G061700 Sobic003G239100 Sobic003G239100 Sobic001G300700--Sobic003G239100 Sobic009G008800 Sobic009G008800 Sobic001G300700--Sobic009G008800 Sobic003G082700 Sobic003G082700 Sobic001G300700--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic001G300700--Sobic003G352700 Sobic001G144700--Sobic001G413700 Sobic003G151900 Sobic003G151900 Sobic001G144700--Sobic003G151900 Sobic001G038400 Sobic001G038400 Sobic001G144700--Sobic001G038400 Sobic007G154200 Sobic007G154200 Sobic001G144700--Sobic007G154200 Sobic010G260600 Sobic010G260600 Sobic001G144700--Sobic010G260600 Sobic002G409000 Sobic002G409000 Sobic001G144700--Sobic002G409000 Sobic001G144700--Sobic002G050100 Sobic001G144700--Sobic009G008800 Sobic001G068500 Sobic001G068500 Sobic001G144700--Sobic001G068500 Sobic003G341500 Sobic003G341500 Sobic002G050100--Sobic003G341500 Sobic002G050100--Sobic004G266700 Sobic001G144800 Sobic001G144800 Sobic002G050100--Sobic001G144800 Sobic005G122800 Sobic005G122800 Sobic002G050100--Sobic005G122800 Sobic002G050100--Sobic009G008800 Sobic003G443200 Sobic003G443200 Sobic002G050100--Sobic003G443200 Sobic005G127200 Sobic005G127200 Sobic002G050100--Sobic005G127200 Sobic002G050100--Sobic001G068500 Sobic002G050100--Sobic003G239100 Sobic010G093300 Sobic010G093300 Sobic001G413700--Sobic010G093300 Sobic001G413700--Sobic005G127200 Sobic001G413700--Sobic002G409000 Sobic002G030800 Sobic002G030800 Sobic001G413700--Sobic002G030800 Sobic006G224500 Sobic006G224500 Sobic001G413700--Sobic006G224500 Sobic001G413700--Sobic001G068500 Sobic001G471800 Sobic001G471800 Sobic001G413700--Sobic001G471800 Sobic001G059600 Sobic001G059600 Sobic001G413700--Sobic001G059600 Sobic009G006300 Sobic009G006300 Sobic001G413700--Sobic009G006300 Sobic004G266700--Sobic005G127200 Sobic004G266700--Sobic003G341500 Sobic004G266700--Sobic001G144800 Sobic004G266700--Sobic001G068500 Sobic004G266700--Sobic010G093300 Sobic004G266700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic004G266700--Sobic003G368100 Sobic004G266700--Sobic003G239100 Sobic004G266700--Sobic001G059600 Sobic001G484000 Sobic001G484000 Sobic005G061700--Sobic001G484000 Sobic005G052500 Sobic005G052500 Sobic005G061700--Sobic005G052500 Sobic005G061700--Sobic002G050100 Sobic004G147400 Sobic004G147400 Sobic005G061700--Sobic004G147400 Sobic005G061700--Sobic001G413700 Sobic005G061700--Sobic009G008800 Sobic002G053900 Sobic002G053900 Sobic005G061700--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic005G061700--Sobic001G046800 Sobic005G061700--Sobic001G300700 Sobic003G239100--Sobic003G082700 Sobic003G239100--Sobic009G008800 Sobic003G239100--Sobic003G352700 Sobic005G145100 Sobic005G145100 Sobic003G239100--Sobic005G145100 Sobic003G239100--Sobic004G266700 Sobic003G239100--Sobic005G127200 Sobic003G239100--Sobic002G053900 Sobic003G239100--Sobic002G030800 Sobic003G239100--Sobic001G484000 Sobic001G059500 Sobic001G059500 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic009G008800--Sobic003G082700 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic009G008800--Sobic001G144800 Sobic003G206700 Sobic003G206700 Sobic009G008800--Sobic003G206700 Sobic003G082700--Sobic003G352700 Sobic003G082700--Sobic003G239100 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic003G082700--Sobic001G471800 Sobic003G082700--Sobic001G068500 Sobic003G352700--Sobic003G082700 Sobic003G352700--Sobic004G047600 Sobic003G352700--Sobic009G008800 Sobic003G352700--Sobic003G239100 Sobic003G352700--Sobic001G068500 Sobic003G352700--Sobic001G484000 Sobic003G352700--Sobic001G059500 Sobic003G352700--Sobic005G127200 Sobic007G047300 Sobic007G047300 Sobic003G352700--Sobic007G047300
Octagon: transcription factors


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