Gene annotation
Transcriptome id Sobic.007G159600.1
Synonym Sb07g023300
Functional annotation expressed protein
UniProt C5YMN2
Pfam -
Panther DB PTHR33088
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g37300.1 : expressed protein
MaizeGDB (Corn) Zm00025a005458
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.002G311501 - -
3 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
5 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
6 Sobic.002G050100 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.003G236400 expressed protein -
8 Sobic.007G159450 - -
9 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.005G145100 phospholipase A2, putative, expressed -
12 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
13 Sobic.001G129600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
14 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
15 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
16 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G028500 app1, putative, expressed -
18 Sobic.002G365801 - -
19 Sobic.005G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@cytokinin-O-glucosyltransferase 3, putative, expressed -
20 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic007G159600 Sobic007G159600 Sobic001G144800 Sobic001G144800 Sobic007G159600--Sobic001G144800 Sobic002G311501 Sobic002G311501 Sobic007G159600--Sobic002G311501 Sobic003G341500 Sobic003G341500 Sobic007G159600--Sobic003G341500 Sobic001G068500 Sobic001G068500 Sobic007G159600--Sobic001G068500 Sobic003G368100 Sobic003G368100 Sobic007G159600--Sobic003G368100 Sobic002G050100 Sobic002G050100 Sobic007G159600--Sobic002G050100 Sobic003G236400 Sobic003G236400 Sobic007G159600--Sobic003G236400 Sobic007G159450 Sobic007G159450 Sobic007G159600--Sobic007G159450 Sobic001G059500 Sobic001G059500 Sobic007G159600--Sobic001G059500 Sobic001G144800--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic001G144800--Sobic004G266700 Sobic003G206700 Sobic003G206700 Sobic001G144800--Sobic003G206700 Sobic001G144800--Sobic001G059500 Sobic001G144800--Sobic001G068500 Sobic001G144800--Sobic003G368100 Sobic009G008800 Sobic009G008800 Sobic001G144800--Sobic009G008800 Sobic001G059600 Sobic001G059600 Sobic001G144800--Sobic001G059600 Sobic005G127200 Sobic005G127200 Sobic001G144800--Sobic005G127200 Sobic002G365550 Sobic002G365550 Sobic002G311501--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic002G311501--Sobic002G365801 Sobic002G311501--Sobic003G368100 Sobic002G311501--Sobic001G059500 Sobic002G311501--Sobic001G068500 Sobic004G165300 Sobic004G165300 Sobic002G311501--Sobic004G165300 Sobic010G096400 Sobic010G096400 Sobic002G311501--Sobic010G096400 Sobic005G160700 Sobic005G160700 Sobic002G311501--Sobic005G160700 Sobic002G311501--Sobic001G059600 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic004G231700 Sobic004G231700 Sobic003G341500--Sobic004G231700 Sobic002G050300 Sobic002G050300 Sobic003G341500--Sobic002G050300 Sobic010G093300 Sobic010G093300 Sobic003G341500--Sobic010G093300 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic003G368100--Sobic002G365801 Sobic003G368100--Sobic001G144800 Sobic003G368100--Sobic010G093300 Sobic003G368100--Sobic005G127200 Sobic002G050100--Sobic003G341500 Sobic002G050100--Sobic004G266700 Sobic002G050100--Sobic001G144800 Sobic005G122800 Sobic005G122800 Sobic002G050100--Sobic005G122800 Sobic002G050100--Sobic009G008800 Sobic003G443200 Sobic003G443200 Sobic002G050100--Sobic003G443200 Sobic002G050100--Sobic005G127200 Sobic002G050100--Sobic001G068500 Sobic003G239100 Sobic003G239100 Sobic002G050100--Sobic003G239100 Sobic003G228700 Sobic003G228700 Sobic003G236400--Sobic003G228700 Sobic001G163800 Sobic001G163800 Sobic003G236400--Sobic001G163800 Sobic001G250100 Sobic001G250100 Sobic003G236400--Sobic001G250100 Sobic009G174300 Sobic009G174300 Sobic003G236400--Sobic009G174300 Sobic005G177400 Sobic005G177400 Sobic003G236400--Sobic005G177400 Sobic003G236400--Sobic002G311501 Sobic003G236400--Sobic007G159600 Sobic003G236400--Sobic002G365550 Sobic002G357800 Sobic002G357800 Sobic003G236400--Sobic002G357800 Sobic001G059700 Sobic001G059700 Sobic007G159450--Sobic001G059700 Sobic009G088900 Sobic009G088900 Sobic007G159450--Sobic009G088900 Sobic003G053400 Sobic003G053400 Sobic007G159450--Sobic003G053400 Sobic001G382900 Sobic001G382900 Sobic007G159450--Sobic001G382900 Sobic010G085800 Sobic010G085800 Sobic007G159450--Sobic010G085800 Sobic004G297900 Sobic004G297900 Sobic007G159450--Sobic004G297900 Sobic009G109000 Sobic009G109000 Sobic007G159450--Sobic009G109000 Sobic008G005100 Sobic008G005100 Sobic007G159450--Sobic008G005100 Sobic009G232100 Sobic009G232100 Sobic007G159450--Sobic009G232100 Sobic001G059500--Sobic003G368100 Sobic001G059500--Sobic003G206700 Sobic001G059500--Sobic009G008800 Sobic001G059500--Sobic001G068500 Sobic001G059500--Sobic001G144800 Sobic001G059500--Sobic002G050300 Sobic001G059500--Sobic001G059600 Sobic001G059500--Sobic003G341500 Sobic003G352700 Sobic003G352700 Sobic001G059500--Sobic003G352700
Octagon: transcription factors


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