Gene annotation
Transcriptome id Sobic.009G072800.1
Synonym Sb09g006120
Functional annotation proteophosphoglycan ppg4, putative, expressed
UniProt A0A1Z5R1D4
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39160 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os05g10830.1 : proteophosphoglycan ppg4, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK07114
Barley HORVU5Hr1G010880.2 , HORVU5Hr1G010880.1 , HORVU7Hr1G100220.2 , HORVU7Hr1G100220.3 , HORVU7Hr1G100220.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G190500 dirigent, putative, expressed -
2 Sobic.002G053900 Cupin domain containing protein, expressed -
3 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.009G215000 - -
5 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
6 Sobic.002G311501 - -
7 Sobic.001G261460 - -
8 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
9 Sobic.003G250700 fasciclin domain containing protein, expressed -
10 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
11 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
13 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
14 Sobic.002G244300 fasciclin domain containing protein, expressed -
15 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
16 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
17 Sobic.005G096101 - -
18 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
20 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic009G072800 Sobic009G072800 Sobic001G190500 Sobic001G190500 Sobic009G072800--Sobic001G190500 Sobic002G053900 Sobic002G053900 Sobic009G072800--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic009G072800--Sobic001G046800 Sobic009G215000 Sobic009G215000 Sobic009G072800--Sobic009G215000 Sobic001G068500 Sobic001G068500 Sobic009G072800--Sobic001G068500 Sobic002G311501 Sobic002G311501 Sobic009G072800--Sobic002G311501 Sobic001G261460 Sobic001G261460 Sobic009G072800--Sobic001G261460 Sobic009G008800 Sobic009G008800 Sobic009G072800--Sobic009G008800 Sobic003G250700 Sobic003G250700 Sobic009G072800--Sobic003G250700 Sobic001G190500--Sobic009G072800 Sobic001G190500--Sobic002G053900 Sobic001G190500--Sobic001G046800 Sobic001G190500--Sobic002G311501 Sobic001G190500--Sobic009G215000 Sobic002G003700 Sobic002G003700 Sobic001G190500--Sobic002G003700 Sobic001G190500--Sobic001G261460 Sobic006G170600 Sobic006G170600 Sobic001G190500--Sobic006G170600 Sobic010G047600 Sobic010G047600 Sobic001G190500--Sobic010G047600 Sobic002G053900--Sobic001G046800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic002G053900--Sobic010G106700 Sobic002G053900--Sobic010G047600 Sobic001G484000 Sobic001G484000 Sobic002G053900--Sobic001G484000 Sobic002G053900--Sobic001G190500 Sobic002G053900--Sobic009G215000 Sobic003G239100 Sobic003G239100 Sobic002G053900--Sobic003G239100 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic001G046800--Sobic002G053900 Sobic001G046800--Sobic009G008800 Sobic001G046800--Sobic001G484000 Sobic010G014400 Sobic010G014400 Sobic001G046800--Sobic010G014400 Sobic003G321400 Sobic003G321400 Sobic001G046800--Sobic003G321400 Sobic001G046800--Sobic003G250700 Sobic009G215000--Sobic002G053900 Sobic009G215000--Sobic001G046800 Sobic009G215000--Sobic009G008800 Sobic009G215000--Sobic010G106700 Sobic009G215000--Sobic001G484000 Sobic009G215000--Sobic009G072800 Sobic005G052500 Sobic005G052500 Sobic009G215000--Sobic005G052500 Sobic001G208600 Sobic001G208600 Sobic009G215000--Sobic001G208600 Sobic003G206700 Sobic003G206700 Sobic009G215000--Sobic003G206700 Sobic003G368100 Sobic003G368100 Sobic001G068500--Sobic003G368100 Sobic003G341500 Sobic003G341500 Sobic001G068500--Sobic003G341500 Sobic002G050300 Sobic002G050300 Sobic001G068500--Sobic002G050300 Sobic005G127200 Sobic005G127200 Sobic001G068500--Sobic005G127200 Sobic010G093300 Sobic010G093300 Sobic001G068500--Sobic010G093300 Sobic004G266700 Sobic004G266700 Sobic001G068500--Sobic004G266700 Sobic001G059500 Sobic001G059500 Sobic001G068500--Sobic001G059500 Sobic001G059600 Sobic001G059600 Sobic001G068500--Sobic001G059600 Sobic001G144800 Sobic001G144800 Sobic001G068500--Sobic001G144800 Sobic002G365550 Sobic002G365550 Sobic002G311501--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic002G311501--Sobic002G365801 Sobic002G311501--Sobic003G368100 Sobic002G311501--Sobic001G059500 Sobic002G311501--Sobic001G068500 Sobic004G165300 Sobic004G165300 Sobic002G311501--Sobic004G165300 Sobic010G096400 Sobic010G096400 Sobic002G311501--Sobic010G096400 Sobic005G160700 Sobic005G160700 Sobic002G311501--Sobic005G160700 Sobic002G311501--Sobic001G059600 Sobic001G261460--Sobic010G047600 Sobic001G514200 Sobic001G514200 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic009G221800 Sobic009G221800 Sobic001G261460--Sobic009G221800 Sobic003G000200 Sobic003G000200 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic003G115200 Sobic003G115200 Sobic001G261460--Sobic003G115200 Sobic001G261460--Sobic010G014400 Sobic009G008800--Sobic001G059500 Sobic009G008800--Sobic010G106700 Sobic003G352700 Sobic003G352700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic009G008800--Sobic003G082700 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic009G008800--Sobic001G144800 Sobic009G008800--Sobic003G206700 Sobic001G107100 Sobic001G107100 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic003G250700--Sobic001G046800 Sobic003G250700--Sobic003G000200 Sobic003G250700--Sobic010G047600 Sobic003G250700--Sobic003G321400 Sobic003G250700--Sobic010G014400 Sobic004G170800 Sobic004G170800 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500
Octagon: transcription factors


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