Gene annotation
Transcriptome id Sobic.005G096101.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHL7
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05960 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os05g06780.1 : LTPL104 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a024453 , Zm00025a012727 , Zm00025a011482
Brachypodium KQK06840
Barley HORVU2Hr1G122320.4 , HORVU2Hr1G122320.2 , HORVU2Hr1G122320.3 , HORVU7Hr1G102030.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G008900 - -
2 Sobic.002G311501 - -
3 Sobic.006G282300 - -
4 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G365550 - -
6 Sobic.009G215000 - -
7 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
8 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
9 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
10 Sobic.002G365801 - -
11 Sobic.003G100900 - -
12 Sobic.010G101900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
13 Sobic.002G053900 Cupin domain containing protein, expressed -
14 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
15 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
16 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
17 Sobic.010G115600 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
19 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
20 Sobic.002G244300 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic005G096101 Sobic005G096101 Sobic001G008900 Sobic001G008900 Sobic005G096101--Sobic001G008900 Sobic002G311501 Sobic002G311501 Sobic005G096101--Sobic002G311501 Sobic006G282300 Sobic006G282300 Sobic005G096101--Sobic006G282300 Sobic009G221900 Sobic009G221900 Sobic005G096101--Sobic009G221900 Sobic002G365550 Sobic002G365550 Sobic005G096101--Sobic002G365550 Sobic009G215000 Sobic009G215000 Sobic005G096101--Sobic009G215000 Sobic004G071000 Sobic004G071000 Sobic005G096101--Sobic004G071000 Sobic009G072800 Sobic009G072800 Sobic005G096101--Sobic009G072800 Sobic007G047300 Sobic007G047300 Sobic005G096101--Sobic007G047300 Sobic003G100900 Sobic003G100900 Sobic001G008900--Sobic003G100900 Sobic001G008900--Sobic006G282300 Sobic010G180100 Sobic010G180100 Sobic001G008900--Sobic010G180100 Sobic001G008900--Sobic005G096101 Sobic002G094600 Sobic002G094600 Sobic001G008900--Sobic002G094600 Sobic002G254900 Sobic002G254900 Sobic001G008900--Sobic002G254900 Sobic010G101900 Sobic010G101900 Sobic001G008900--Sobic010G101900 Sobic001G002800 Sobic001G002800 Sobic001G008900--Sobic001G002800 Sobic002G252000 Sobic002G252000 Sobic001G008900--Sobic002G252000 Sobic002G311501--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic002G311501--Sobic002G365801 Sobic003G368100 Sobic003G368100 Sobic002G311501--Sobic003G368100 Sobic001G059500 Sobic001G059500 Sobic002G311501--Sobic001G059500 Sobic001G068500 Sobic001G068500 Sobic002G311501--Sobic001G068500 Sobic004G165300 Sobic004G165300 Sobic002G311501--Sobic004G165300 Sobic010G096400 Sobic010G096400 Sobic002G311501--Sobic010G096400 Sobic005G160700 Sobic005G160700 Sobic002G311501--Sobic005G160700 Sobic001G059600 Sobic001G059600 Sobic002G311501--Sobic001G059600 Sobic006G282300--Sobic002G365550 Sobic006G282300--Sobic004G071000 Sobic006G282300--Sobic002G365801 Sobic006G028400 Sobic006G028400 Sobic006G282300--Sobic006G028400 Sobic008G055100 Sobic008G055100 Sobic006G282300--Sobic008G055100 Sobic006G282300--Sobic010G096400 Sobic010G212500 Sobic010G212500 Sobic006G282300--Sobic010G212500 Sobic003G119500 Sobic003G119500 Sobic006G282300--Sobic003G119500 Sobic007G178900 Sobic007G178900 Sobic006G282300--Sobic007G178900 Sobic001G263900 Sobic001G263900 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G017500 Sobic009G017500 Sobic009G221900--Sobic009G017500 Sobic003G099166 Sobic003G099166 Sobic009G221900--Sobic003G099166 Sobic003G371400 Sobic003G371400 Sobic009G221900--Sobic003G371400 Sobic008G091557 Sobic008G091557 Sobic009G221900--Sobic008G091557 Sobic001G208600 Sobic001G208600 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000 Sobic002G365550--Sobic002G365801 Sobic002G365600 Sobic002G365600 Sobic002G365550--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic002G365550--Sobic002G365500 Sobic002G365550--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365550--Sobic010G115700 Sobic002G365550--Sobic010G212500 Sobic002G365550--Sobic010G096400 Sobic002G368300 Sobic002G368300 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic002G053900 Sobic002G053900 Sobic009G215000--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic009G215000--Sobic001G046800 Sobic009G008800 Sobic009G008800 Sobic009G215000--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic009G215000--Sobic010G106700 Sobic001G484000 Sobic001G484000 Sobic009G215000--Sobic001G484000 Sobic009G215000--Sobic009G072800 Sobic005G052500 Sobic005G052500 Sobic009G215000--Sobic005G052500 Sobic009G215000--Sobic001G208600 Sobic003G206700 Sobic003G206700 Sobic009G215000--Sobic003G206700 Sobic004G071000--Sobic002G365801 Sobic004G071000--Sobic002G365550 Sobic004G071000--Sobic002G368300 Sobic004G071000--Sobic002G365500 Sobic004G071000--Sobic008G055100 Sobic004G071000--Sobic010G115700 Sobic004G071000--Sobic010G212500 Sobic004G071000--Sobic002G365600 Sobic004G071000--Sobic003G053400 Sobic001G190500 Sobic001G190500 Sobic009G072800--Sobic001G190500 Sobic009G072800--Sobic002G053900 Sobic009G072800--Sobic001G046800 Sobic009G072800--Sobic009G215000 Sobic009G072800--Sobic001G068500 Sobic009G072800--Sobic002G311501 Sobic001G261460 Sobic001G261460 Sobic009G072800--Sobic001G261460 Sobic009G072800--Sobic009G008800 Sobic003G250700 Sobic003G250700 Sobic009G072800--Sobic003G250700 Sobic001G360700 Sobic001G360700 Sobic007G047300--Sobic001G360700 Sobic004G047600 Sobic004G047600 Sobic007G047300--Sobic004G047600 Sobic009G162300 Sobic009G162300 Sobic007G047300--Sobic009G162300 Sobic003G352700 Sobic003G352700 Sobic007G047300--Sobic003G352700 Sobic001G471800 Sobic001G471800 Sobic007G047300--Sobic001G471800 Sobic004G111100 Sobic004G111100 Sobic007G047300--Sobic004G111100 Sobic002G146000 Sobic002G146000 Sobic007G047300--Sobic002G146000 Sobic002G207200 Sobic002G207200 Sobic007G047300--Sobic002G207200 Sobic002G203900 Sobic002G203900 Sobic007G047300--Sobic002G203900
Octagon: transcription factors


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