Gene annotation
Transcriptome id Sobic.001G190500.1
Synonym Sb01g016760
Functional annotation dirigent, putative, expressed
UniProt C5WVA2
Pfam PF03018
Panther DB PTHR21495 PTHR21495:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42510 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os07g01620.1 : dirigent, putative, expressed
MaizeGDB (Corn) Zm00025a016259 , Zm00025a006260
Brachypodium PNT66222
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
2 Sobic.002G053900 Cupin domain containing protein, expressed -
3 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.002G311501 - -
5 Sobic.009G215000 - -
6 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G261460 - -
8 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
9 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
10 Sobic.006G100501 - -
11 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.004G301600 integral membrane protein, putative, expressed -
13 Sobic.003G426200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
15 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
16 Sobic.002G085800 cytokinin-N-glucosyltransferase 1, putative, expressed -
17 Sobic.007G085500 glycosyl hydrolases family 16, putative, expressed -
18 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
19 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
20 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G190500 Sobic001G190500 Sobic009G072800 Sobic009G072800 Sobic001G190500--Sobic009G072800 Sobic002G053900 Sobic002G053900 Sobic001G190500--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic001G190500--Sobic001G046800 Sobic002G311501 Sobic002G311501 Sobic001G190500--Sobic002G311501 Sobic009G215000 Sobic009G215000 Sobic001G190500--Sobic009G215000 Sobic002G003700 Sobic002G003700 Sobic001G190500--Sobic002G003700 Sobic001G261460 Sobic001G261460 Sobic001G190500--Sobic001G261460 Sobic006G170600 Sobic006G170600 Sobic001G190500--Sobic006G170600 Sobic010G047600 Sobic010G047600 Sobic001G190500--Sobic010G047600 Sobic009G072800--Sobic001G190500 Sobic009G072800--Sobic002G053900 Sobic009G072800--Sobic001G046800 Sobic009G072800--Sobic009G215000 Sobic001G068500 Sobic001G068500 Sobic009G072800--Sobic001G068500 Sobic009G072800--Sobic002G311501 Sobic009G072800--Sobic001G261460 Sobic009G008800 Sobic009G008800 Sobic009G072800--Sobic009G008800 Sobic003G250700 Sobic003G250700 Sobic009G072800--Sobic003G250700 Sobic002G053900--Sobic001G046800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic002G053900--Sobic010G106700 Sobic002G053900--Sobic010G047600 Sobic001G484000 Sobic001G484000 Sobic002G053900--Sobic001G484000 Sobic002G053900--Sobic001G190500 Sobic002G053900--Sobic009G215000 Sobic003G239100 Sobic003G239100 Sobic002G053900--Sobic003G239100 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic001G046800--Sobic002G053900 Sobic001G046800--Sobic009G008800 Sobic001G046800--Sobic001G484000 Sobic010G014400 Sobic010G014400 Sobic001G046800--Sobic010G014400 Sobic003G321400 Sobic003G321400 Sobic001G046800--Sobic003G321400 Sobic001G046800--Sobic003G250700 Sobic002G365550 Sobic002G365550 Sobic002G311501--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic002G311501--Sobic002G365801 Sobic003G368100 Sobic003G368100 Sobic002G311501--Sobic003G368100 Sobic001G059500 Sobic001G059500 Sobic002G311501--Sobic001G059500 Sobic002G311501--Sobic001G068500 Sobic004G165300 Sobic004G165300 Sobic002G311501--Sobic004G165300 Sobic010G096400 Sobic010G096400 Sobic002G311501--Sobic010G096400 Sobic005G160700 Sobic005G160700 Sobic002G311501--Sobic005G160700 Sobic001G059600 Sobic001G059600 Sobic002G311501--Sobic001G059600 Sobic009G215000--Sobic002G053900 Sobic009G215000--Sobic001G046800 Sobic009G215000--Sobic009G008800 Sobic009G215000--Sobic010G106700 Sobic009G215000--Sobic001G484000 Sobic009G215000--Sobic009G072800 Sobic005G052500 Sobic005G052500 Sobic009G215000--Sobic005G052500 Sobic001G208600 Sobic001G208600 Sobic009G215000--Sobic001G208600 Sobic003G206700 Sobic003G206700 Sobic009G215000--Sobic003G206700 Sobic006G150100 Sobic006G150100 Sobic002G003700--Sobic006G150100 Sobic004G110700 Sobic004G110700 Sobic002G003700--Sobic004G110700 Sobic005G127400 Sobic005G127400 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic003G349400 Sobic003G349400 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic003G132400 Sobic003G132400 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic001G261460--Sobic010G047600 Sobic001G514200 Sobic001G514200 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic009G221800 Sobic009G221800 Sobic001G261460--Sobic009G221800 Sobic003G000200 Sobic003G000200 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic003G115200 Sobic003G115200 Sobic001G261460--Sobic003G115200 Sobic001G261460--Sobic010G014400 Sobic006G170600--Sobic006G150100 Sobic006G170600--Sobic002G003700 Sobic006G202600 Sobic006G202600 Sobic006G170600--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic006G170600--Sobic004G301600 Sobic004G180700 Sobic004G180700 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic002G329200 Sobic002G329200 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic003G078900 Sobic003G078900 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic004G050700 Sobic004G050700 Sobic010G047600--Sobic004G050700
Octagon: transcription factors


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